Report for 5550.m00144

 > 5550.m00144, length: 622, copies: 1 

MPPSPPPLLLLLAVLLAAAPAAAQSATPREDDVRCLKEVKAELRDPDGRLSAWSFGNTSAGALCLLSGVSCWNPQ

ESRIIGLSLSGFGLQGGIPSALQFCSAATTLDLSNNALVGVIPPALCDWIPFVVNLDLSGNQLSGQLPSELANCR

FLNSLKLSGNSFSGQIPDSLGRLDRLKSLDLSDNRLDGQIPPQLATFGKDSFAGNKGLCGRPVSSRCGRALSGAG

LGIVIAAGVFGAAASLLLAFFFWRCTGKSKGGRRRRRGGSESGGGSAEDGSWWAERLRAAHNRLAPVSLFQKPIV

KVKLADLMAATQDFSTSHIVVAGSSRAGTAYRAVLRDGSALTVKRLHSCPLSEKAFRAEMGRVGQLRHPNIVPLL

GFCVVEDERLLVYKHMESGALSSVMKEPGEAPLDWATRLRIAVGAARGLAWLHHGFQVPQIHQNLSSSAVLLDED

YEARFTDVGLTRLVRMAPGEGGDTSPFLNGDFGEYGYVAPECASNPVATMKGDVYAFGVILLELVSGQEAATVTG

DAAGEGFKGTLVDWVNQLKASGRIGDAVHKSLRGNGHDSEIDEFVKIAFACIMVHPRERFSMYRVYHSLKSIGQG

RDVSEQFDEFPLAYNKDESDTM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	127	150	0.3
LRR [Pfam ls]	151	174	6.6
LRR [Pfam ls]	175	198	0.14
Ser/Thr pkinase [Pfam ls]	314	596	6.3e-13
Ser/Thr pkinase [Pfam fs]	328	517	8.1e-18

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	102	125	0.56
LRR [sensitive, ls]	102	125	11
LRR [sensitive, ls]	127	150	0.015
LRR [sensitive, ls]	127	150	0.3
LRR [sensitive, ls]	151	174	0.33
LRR [sensitive, ls]	151	174	6.6
LRR [sensitive, ls]	175	198	0.0067
LRR [sensitive, ls]	175	198	0.14

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	7	202	3e-16
Xa21 [O. sativa]	74	191	2e-11
Cf-9 [L. pimpinellifolium]	79	218	3e-11
CLV2 [A. thaliana]	79	195	3e-12
CLV2 [A. thaliana]	82	199	7e-11
FLS2 [A.thaliana]	82	609	4e-48
FLS2 [A.thaliana]	82	194	5e-13
FLS2 [A.thaliana]	82	194	2e-11
Xa21 [O. sativa]	82	396	1e-14
Rpg1 [Hordeum vulgare]	297	577	8e-24
Pto [L. esculentum]	304	595	7e-29
Rpg1 [Hordeum vulgare]	311	598	6e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	226	248	out -> in

Report for 5550.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)