Report for 5562.m00152

 > 5562.m00152, length: 752, copies: 1 

MATTAIGGWIASACISKLVDKVCSYAGDQYEYQREDTKDKLRSLKESLLTVQELVCRAERLQGRETNIANQLRGI

KDAAYQAEDVLDLFDYRVLEAQAEVMDKVTTKAQVMGKVTTNSISSAIAGSSSSCSSSSSSITTLSSDSTVKRSV

RALKRFLFCDEDLTKLAAAVTIFNEIDSRMKTLLELLKLENRAPEHPVQWRTTTSMLDTTKFFGRVSEGKHLKKL

LIQKNKKSSQPYDVISIVGIAGVGKTALAQKVYSIFYDKEKHFDFMAWLHVSNKFDVERLIKELVQSVHLCTAAE

LSSISSLDQAQRILKDKLKGSRILVVFDDVWNEMSSQWENLCKPLQSTSKGSKLIVTTRSQNVANINGATEIVHL

DGLEDEDYWEHFLQCAFHDANPSQFPQLESIGQELVKKLAGSPLAAQTVGNLLKFKLDEKHWETVNGRKLWQIEQ

KEDGIMPALRLSYVRLPDHLKQCIIYFALFPKNYQLRGDALIRMWRAHGFVNKETPDETAYRYINDLLQISFIRK

VANIEDHYVVHDLLHDFAESISNGEHFRIEDDFHVSIPTNVRHLYVNASNISTVYASLEENIEIKKNLRSLIICK

ADVASWSWTRTSNFNYALEETLKELGSLRVLVLRHPAGVLPNNIQHMVHLRYLDIKESREFTFLPTSLFGLYHLQ

ALSLQSRHKIDWQAHIPPGIQPWQCKEKKKNSIIIEKLNQECICVHSAFYGQLGHCKKLVRPGTSHQKKVHTAPC

YF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	195	506	8.5e-60
NB-ARC [Pfam fs]	238	506	3e-60

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	5	681	2e-65
Mla1 [Hordeum vulgare].	10	685	1e-29
Pib [Oryza sativa].	38	683	2e-26
Xa1 [Oryza sativa]	190	685	2e-64
N [N. glutinosa]	239	679	2e-11
RPM1 [A. thaliana]	239	702	1e-34
RPS2 [A. thaliana]	239	680	1e-18
Pi-ta [Oryza sativa]	239	654	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	28	48

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5562.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)