Report for 5580.m00121

 > 5580.m00121, length: 918, copies: 1 

MLVHRSIEKDVFEPLVMRISEIAQHYFGTVGSSETGEKGPTVPEFPEKIKWEVQHLEELFEGIKEDKEEVYEGFK

SVSLAISEWQRRLAIAYQNAARDPRPFEGMKWAMEYHEMWVEDNNIIGAGDEILDFDEHELFESLRYVKTAQGGS

EAHLLESIKSGMQCIKNVLATIRSRKEADNRSWCIVEQVFSPLLKLLKTINHLVSEAAARNNKSENYKILVKIDA

EVNCLQDALDLIDRNKNEVYENFRLIEDLILPLLTFLKATYNDQSESLSFLDAVKHGVNYLEGVLDKIEQKQRDG

NDNFHIVKAAFSPLLTCMYTFRRISLETLAHEDKSDAFILLDRIRDDLSQLKDVLQMVQEKENGIYSNFDAIEEH

IDEIYDGHMNVEGSLKLNQMGGLRDKLQLIHEEITNIRGKVDDSFKVQEVSCHVMRMAAAHEASSSHQLSASNTF

CITMESAQMWQLKVIIDELETRLRHCLLCLAVFPVDAIIKKRLLIHWWIGECFVTSVSEGKSFFNKLLLSNGFIT

PVKKYHCDKVHSCKVQPWIRGLLIEAAKSKAFVELSSDGSSRNDFTRTRRACLHAGKILTNFHPDVLTIYNIKQQ

YVELNKTWFSEKNRLTTLQLGQWHDASYDPRAHHVEINNAKFLKQVKSCKQLKYLSLRGISRIEALPNSIGKLSR

LVILDLKACHNLEDLPKEIVKLVKLEYLDVSDCYLLSGMPKGLGKLFQLEVLKGFVLSNAKSKDLCHLNELVMLK

KLRKLSIRIGYSIDSGQFANFGELCALRSLTLIWGAHPISTHGSSPSHAAPHAMPCVLPLGLEKLELRCFPLVEL

PHWVSPEKLRKLKKLYISGGNISDLGDLKSWEVTVLRLRFLKHMNYSWTALHDSFRKLDVLEAHECENLQPWPSC

GKGLWRKEPNGTIAPVLT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	467	509	4.3e-08
LRR [Pfam ls]	699	722	1.6
LRR [Pfam ls]	836	857	7.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	651	674	1.1
LRR [sensitive, ls]	651	674	22
LRR [sensitive, ls]	675	698	1.2
LRR [sensitive, ls]	675	698	24
LRR [sensitive, ls]	699	722	0.079
LRR [sensitive, ls]	699	722	1.6
LRR [sensitive, ls]	836	857	0.35
LRR [sensitive, ls]	836	857	7.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	462	903	9e-11
Pib [Oryza sativa].	467	703	1e-13
Mla1 [Hordeum vulgare].	469	749	1e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5580.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)