Report for 5591.m00194

 > 5591.m00194, length: 574, copies: 1 

MADLAIGISKTMVEALVNKVKSTIKEEEELWQIVQRDTVFMKDEFEMMQSFLKTADWERIKNNVVRTWVSQVRDL

SYDAEDCIKSILLLDTNRSFWTMCLRLLASCSCKSEAASPLDQAVAEIELLKARVEEVSNRNIRYSLINDSGSKP

AAMPRHLASAASAVGTSAVGVLTEAWCNAKKQPGFVDLTMLVTENSDALRVISLWGTGGGLGGMTSVIKEAYEKP

EICQKFRARAWLKLAHPFNPQEFIRSLGHQFYRNTWKEQQGEITGIDVLTGMDAAQGTNLVKEFVKELNKHKYLI

VLEDLSNMAEWHAVRTYLPDGKHGSRIVVSTQQLEIARLCAGQHYQVLELKKLSDNDSICVFFHEAFERVEVGMV

AGGPSLLEMSNEVHLVGCSSDEEKLSNLISSARHSDRSHVISVWGFPGLGKSVLVRTVRRRQASNPTSPFDWYGW

VDVSYPFNFSDFCRRMHSYMFEQSQGEYAYMPMNPKPEENIIQECREFLQNSRCLIVIDGLRSREQWDSIKSLID

GSSKCCILVVTAEENVAKYCAVQDDAAVHRVNALGSEAALEIFKQKKFD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	47	574	4e-60
Pib [Oryza sativa].	116	388	7e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	116	136

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5591.m00194

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)