Report for 5591.m00195

 > 5591.m00195, length: 604, copies: 1 

MATEFRGVGTLRDAHTLEEAKYILAKCGGIPEVIMALARYVASEQEDIRQRKLSHLKDNFMHELETNPEFVSLRD

LFSWMHFSFEALPHSIKPCILYLAVFQVKRIRRSHFVRRWIAEGYSKCTDSKTMEDYTGELFDRLAKETDTMPEW

RFNSFFHEYINSRLMEERVVFFPLVVSVLDGSRSLTTEVMGQHLVIGSSWKRDEEYVYYEDLDVSHLQSLTVYGA

WKSLFVPYKMKSVRVLDLEGTTHVGFGDDELKRILELLPRLRFLSLRGHREITHLPDSLSGLKYLQTLDIRHTSV

VYIALQTLHELQYIRAGTTAPWMDGGKGLAYEASSISSCASVASSYLPKFLRRGGPVGPCQGVKMPRDGIHHLKA

LHTLGAVHINSSSGQAILADIYRLKQMRKLEVSGINRKNSKHLCHAIINHKNLESLSLQLDKEKHVVCWDDISPP

SSVRSLKLYGHVEMLSARRFKNLRNLRKLCLEMNTTLFTQNVLLLGSVSSLRTLRLHVKQNQDGVLQFRAHLFSK

LQHLEIVCRSNLHVIFDEEAMQKLELLKIHCHDGSLLQLSGLKHPVSLNQVRVLGTFDDALMESWRQQLAEHLRN

PALV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	73	126	9.7e-10
LRR [Pfam ls]	265	288	6.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	237	264	4.8
LRR [sensitive, ls]	237	264	98
LRR [sensitive, ls]	265	288	0.31
LRR [sensitive, ls]	265	288	6.2
LRR [sensitive, ls]	289	312	0.86
LRR [sensitive, ls]	289	312	17

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	7	307	1e-17
Pib [Oryza sativa].	17	578	2e-53
RPM1 [A. thaliana]	20	579	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5591.m00195

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)