Report for 5611.m00102

 > 5611.m00102, length: 464, copies: 1 

MSKNGCNNSYCGCYHGGDEAPPVQAHQAAGRRVCQAQRRAQEIKFLIDELSTMSAALEMLADSDQQLNPEMRDWR

DKLRELAYDLEDCIDDFMSRVDHDGEKMGFRKFFRKLKKLKARHEIANEIEELKIRAIEASERHKRYNFDQLAHN

SSTFGIDPRLSAFYEEVDKLVGIDGPKKRIIELLAMEMKGSLKVVSIVGCGGLAFVSVSQRPDIKKILNDIAEGV

GISSRTPVGNDEKKLINILREHLKNKRYFVVIDDLWDAKAWKIIELALLNNNCGSRIITTTRSVTVASCCSSQVG

YIYEMKPLSFNESKWLFLKRTFDYENSHYPHPENILDKILRKYGGLPLAIITISSLLLDQHEIDEWHRVLNTIGC

GLANDPNAETMSNILSLSFFNLPHYLKTCFMYLSVFPEDRKIKKRHLVSKWIAEGFIHRHIKVQLLEGLLTICHS

YKWCLTICHKAHMS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	155	437	4.1e-40
NB-ARC [Pfam fs]	204	437	2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	41	433	2e-75
Pib [Oryza sativa].	53	317	5e-12
I2 [L. esculentum]	61	432	7e-28
Pi-ta [Oryza sativa]	74	433	3e-42
RPM1 [A. thaliana]	79	432	7e-35
Pib [Oryza sativa].	159	431	2e-27
Xa1 [Oryza sativa]	180	432	4e-14
RPS2 [A. thaliana]	237	432	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5611.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)