Report for 5611.m00103

 > 5611.m00103, length: 735, copies: 2 

MKPLSFDDSKWLFLKRAFGYEKSHYPHLEDVLDKILGKCGGLPLAIITISSLLSYQHAIDEWHRVLNDIGYGLAR

DPYAETMSNILSLSFFNLPHHLKTCFMYLSVFPEDYNIDKRRLVSKWIAEGFIQDEQGRSAYRTGELYFNELINR

SLIEPVDVKYGQAKACRVHDIILDYIKCKATEENFVTSLGSTVPGCTTEYKVRRLSVINSNEEDVNIPTSLDLSQ

VRSLTIFGNRMQTSVFDFKFLRVLDLVYRDRMGDLFANIEKLFHLKYMCISSYGVDYLPEKIGELKYLETLDIRQ

TNVEILPSTITNLQRLARLFINQDTRFSDETTIGQLKSLEELKEFVVSQSEQVTALQEVTPDDIEILGAIPSLLF

LELQTYGGTNGRIIIHGNNRFISLKYFSLVIHACGTALEFEAGSMPKVEHLKLQFHLHELECLNGSSDSGIQHLS

ALGKVEVKIICKPSYVIELNGLNYDLMEQKSDCIVRCVARTIKTAVETLPNHPTISFKTYHVEECEHFETKIEEK

QTAQAQRDRHLGILCMAPEDIEILGAIPSLVFLKLETLGGTNGRIIIHGNNRFISLKYFSLAIGACGTALEFEEG

SMPKVEHLKLDFRLHELECLNGASDLGIQHLSALCKVEVEINCNCFKHTSNFFDDFELKCLNYDLMEETSDCIVR

CVAITIKSAVDTLPNHPTISFQINISNCAEAHAVVSLILDPTEIVVIKIIQTNILPLKVL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	12	133	1.7e-31

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	342	4e-22
Mla1 [Hordeum vulgare].	1	348	3e-57
Pib [Oryza sativa].	1	327	3e-44
Pi-ta [Oryza sativa]	3	459	2e-55
RPM1 [A. thaliana]	7	404	3e-31
Xa1 [Oryza sativa]	7	350	5e-21
RPS2 [A. thaliana]	12	301	4e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5611.m00103

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)