Report for 5646.m00170

 > 5646.m00170, length: 735, copies: 1 

MGALLSKLGNLLKEEYKLHRNLREEITFLKSELESMEAALLKVSEAPIDQPPDRQVKIWARDVRDLSYDIEDSVD

EFMVCIDSRTPNNSCSFGGFVYRSMDLLNRAKFRHKIGTDIKGIKSRIKEVNDRHDRVNEFVGIDEKSDELVRML

MGTGESSIRKRKRDVSEESKQKLKIVSIVGVGGLGKTTLANVVYERLKTQFYCFAFVPVSLTPNMEKIFKNMLHQ

FDKKKYRNINEVTWDEAQLIAELREFLRNKRYLIVIDDIWDISACEKIKCSFVDSENGSGIITTTRNVDVAKEVG

GVYQLKPLCHVDSRKLFNLRIFGAEDKCPPQLAELSERILKKCSGVPLAIITIASMLASKIENENAHEDDFKQLS

ISNLSHVRSLIFFKGFNSFPAYSSFPLLRVLNLSGCQKVDNNHCKDICLYWLHLRYLNLSRTSVTEIPREIENLQ

SLQVLCINGIEIEDLPSTFVRLGQILYLNVYLKTRIPDGFGSLKYLQELKGRILIGSLTNVHDLGKLTELRRLHI

EFQGWETSWKEPLHRCLSNLVSLEDLTIAGCFGSLDSACDDSSPRPQQLCSIGMWNSTIHAVPNWMVSLSTLSNL

TIKLDTLKERDLQILGSIPSLSRLYLGVEKPTVDRDERLIISYRFKCLSLFEYWSDTMEIEFAQGAMQNLRTLKL

FIDVHKTHDHVDFGLENLSALEHAYLYLNNCPEEMHEVVEAGIRRQIHMNPNSPTLDLSM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	135	437	1.6e-25
NB-ARC [Pfam fs]	166	360	7.3e-38
LRR [Pfam ls]	428	450	0.012

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	428	450	0.0011
LRR [sensitive, ls]	428	450	0.012
LRR [sensitive, ls]	451	473	2
LRR [sensitive, ls]	451	473	22

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	429	5e-35
I2 [L. esculentum]	2	554	3e-24
Mla1 [Hordeum vulgare].	4	401	9e-72
RPM1 [A. thaliana]	5	404	2e-24
Pib [Oryza sativa].	45	301	3e-13
RPS2 [A. thaliana]	110	364	2e-13
Pib [Oryza sativa].	139	360	1e-21
Xa1 [Oryza sativa]	162	361	2e-14
Mla1 [Hordeum vulgare].	376	735	2e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	17	42

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5646.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)