Report for 5659.m00143

 > 5659.m00143, length: 767, copies: 1 

MTTSRMTRQRYPDDQYDRFWSTDEAHPLSTNISTQTTIQPSTEFAVPSPVLQKAIVPSGNSMKLVFFSGQVDVLL

RNHFVILHFADFQNNKSREFTVSIDNGVHSSPYSTPYLNGLSVTGSWSSDSEGKYNFTIAATAISALPPILNAYE

VYGRIVHDNPTTFSQDFDAIMAIKYEYGIKKNWMGDPCFPHEYVWDGVKCSDAVIFPTANCMGRYPILSHCLLPS

STSSSTDLAMVPELRGAPGHITNHWDHLQEPENRRFTYQELEKFTDNFKHLIGHGGFGHVYYGCLEDSTEVAIKM

RSELSSHGLDQFLAEVQSLTKVHHRNLVCLVGYCWEKEHLALVYEYMSRGNLCDYLRGKIGMGENLNWKTRVRVA

LEAAQGLDYLHKGCNLPIIHGDMKTNNILLGQNFKAKIADFGTHISAVAAGSMGYIDSEYYTTGRLTESSDVYSF

GIVLLEITTGEPPIIPEKGHIVQRVKKKIVSGNISSVADAHLGGAYNVSSMWKVVNIAMMCTTDIATQRPKMADV

VVQLKESLDLVEVQGDRGDKENLAKVTIGELPIIPGNGHIIQHMMQIVTGNITSVADERLGGSYIFNSMWKVLDA

MMMCITDIASQRLMMSAVVLQLKENHELEEAHGDGLLGKCILIMVINADYGGGDCAARVEQLALARPLGSPSFLC

TSTLGFHCSHVRLTVSSKTLQRRRRWLYFVACVEDLAVPGVSVNGATNLRGGSDSLGGDASPAGGYGSAAPGPSD

SMSGSGGNNSRHLQGPI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	271	529	1.9e-24
Ser/Thr pkinase [Pfam fs]	272	417	1.8e-30
Ser/Thr pkinase [Pfam fs]	442	463	0.00064

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	257	537	3e-47
Rpg1 [Hordeum vulgare]	257	529	5e-29
FLS2 [A.thaliana]	259	529	4e-31
Rpg1 [Hordeum vulgare]	261	537	2e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5659.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)