Report for 5660.m00134

 > 5660.m00134, length: 769, copies: 1 

MKPLSHEDSKKLLYTRIVGGEDKCLDSDPSVDACEKILKKCCGVPLAIITMASLLANKPMEDWPVVYKSIVWGME

AMTIIFPEDYYIEKNMLIWKWITEGFVHEEKAAGIGLFELGEGYFNELINRSLILPAEAEDKGYIDGCHVHDMVL

DLVRLLSAEENFVTVLDGNEELVLLSRNSRRLALQCKSSEPNVECPLLANKGVEQLRSFVVTECCDISMASTGSH

VIRVLALQNCLILDHCSKHSLQHVWSLLHLRYLGLQYIDSIEIPEDVGHLKFLQVLDLLGTQIKELPESMGLLTK

LVCLRANRIYKVSAGLIGELTSLEEIWIEAENDDRIQFMKALGKLSKLRVLWIRLSTYEPDERPNRDLLDCLHNL

HSIQTVDIYASSGKKSVMWEEGHASPQCLRHLCLQTLKFCRFPMWLNSSFLPNLCYLELQVMALKEQDIETLGRL

PELNYLKLDSNYTATISMGGTSGDVYFQKLRIFKAPRSLVWFDLHNIICNEKAIMPSLESLKFTVHVRFLKDTNL

LCFENQLGFRNLGRTSLQRVEADIYCAGAHTKEVEEAEAALAQAAAVHPNHPTLKIVRISEDRLLSPYKELSVAN

KLLLISYNSSRPRLIPDRNITYKTAFKNVKARVVKDDVGYFDFHWLLHNPNIRKFEVYIDCEDATLEEVEEAEAA

AWCAANDHPNRPALEIIRRDEDKMMLFDIHQEKFSVSINYENASLEEVEEAEAAARYAVDVHLNRPTLELKRYGE

KKMALSDQDQTEQKPCTTL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	581	1e-56
Pib [Oryza sativa].	1	308	2e-25
Pi-ta [Oryza sativa]	3	282	2e-20
RPM1 [A. thaliana]	36	462	3e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5660.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)