Report for 5662.m00098

 > 5662.m00098, length: 680, copies: 1 

MTKLLHSACLLICISGAIGLAAAAAGHPGCQTRCGDVDIPFPFGIGDHCAIHEGFRLECDNATKGTSNQKPFWGD

FEVIKISMEDGKVWVKAYMSRQCYDQSTGGMSYSDASANLSGSSFWLSDTDNKITVIGCKTLAYMTTDSYVIGCS

SACDNKVNKLTPKNGSCSGAGCCQANVPKSIQYYQGYFNEGYNTTKIWMSSPCSYMAVMETAAFNFSTSYLTSSV

FYDTYKGGVPVVYDWAITSKTCTESRRNKTSYACISNNSQCIDNLTNAQGYRCKCSNGYEGNPYIKDGCKDIDEC

LNNATYPCKGICTNTLGNFTCSCSPGSYMMNGDCMPKKKLRFDSVPVVVELQEATNRFNEQQILGQGGHGTVYKG

LLKGNMEVAVKRCMTINEHQKKEFGKEMLILSQINHKNIVKLLGCCLEVEVPMLVYEFIPNGTLFDLIHGNHGQQ

ISLATRLQIAHESAEALTYLHSCASPPILHGDIKSSNILLDRNLIAKVSDFGASILAPTDESQFVTLVQGTCGYL

DPEYMQLCQLTDKSDVYSFGVVLVELLTCQKAFNLNAPEHEKSLSMRFLNAMKNNKLADILDDQIKNSENMPFLE

EIAELAAQCLEMSGVNRPSMKHIADNLDRLRKVMQHPWAEQNSEELESLLGESSMVSSRYTSTGNFSIERKGVME

LDSGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	358	623	2.1e-43
Ser/Thr pkinase [Pfam ls]	358	639	3.5e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	350	631	9e-37
Pto [L. esculentum]	350	628	2e-46
Rpg1 [Hordeum vulgare]	351	637	1e-30
Rpg1 [Hordeum vulgare]	351	630	7e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 5662.m00098

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)