Report for 5662.m00100

 > 5662.m00100, length: 533, copies: 1 

MAVMEDKAFQFSTTYLNSTVFNDTYKEGVPVVLDWVITLDTCEKAKSKTTSYACVSTNSICNDDPSGGYRCNCSH

GYEGNPYIKDGCEDINECLDNVTYPCPGICNNTMGSFTCSCHQGNYMENGTCIPNRKSGFLALPIVGTSVGLVIL

VITITCACLIHDRRKLQHIKNQYFRRHGGLLLYEEMKSKQGLAFKIFSEEELQQATNKFDEHQVLGQGGNGIVYK

GHLKDNLEVAVKRCMTIDEQKKKEFGKEMLILSQINHKNIVKLLGCCLEVEVPILVYEFIPNDTLYHLIHGNYNG

WHIPLVTRLRIAHESAEALAYLHSCASPPILHGDVKSSNILLDSNLSAKVSDFGASILAPTDETQFVTLVQGTCG

YLDPEYMQTCQLTDKSDVYSFGVVLLELLTRKKPFNLDALENEKCLSMRFLSAMKENKLSDLLDDQIKNNENMGF

LEEIAELARQCLEMSGVDRPSMKEVRDKLDRLRKVIEHPWTHDNPEELESLLGESSCVVISEVESTGNFSIERKV

VKGLESGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	209	475	6.4e-43
Ser/Thr pkinase [Pfam ls]	209	491	4.6e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	138	483	4e-35
Pto [L. esculentum]	197	480	8e-43
Rpg1 [Hordeum vulgare]	197	489	2e-28
Rpg1 [Hordeum vulgare]	202	482	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	134	156	in -> out

Report for 5662.m00100

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)