Report for 5662.m00102

 > 5662.m00102, length: 721, copies: 1 

MAKLLLSALLICISAIWVVAAADVPAGRRGCQTRCGNLDIPFPFGIGDQCAIHGGFGLDCKNDSGTYRTFIGPFE

VTKISVPDAKAWMKMGISWQCYDPVTKQMNDSMVGQNFTNTPYRFSYEDNKIFVIGCNTMAYMRGVSYVIGCLST

CSDEPTNGSCSGAGCCSVDVPPDLGYVEAYFNKDYNTSQIWNYSRCGYLVVMEKAAFRYSTTYIPSINFWNDYNG

TVPAVMDWVIRRETCEEAKRDMSSYACVSDNSDCHNSTNGHGYLCKCSKGFDGNPYIKDGCKDINECLDNTTYPC

AGLCQNTMGGYDCSCHQGQHKVEDVCVPDQKNQKSSWEMPVVGASVGFVILVIIATCSYLIHERRKLQHIKQKYF

KLHGGLLLFQEMNSNERKSFTIFSEAELQHATNKFDKNQILGHGGHGTVYKGLLKDNTEIAVKKCMTMDEQHKKE

FGKEMLILSQINHINIVKLLGCCLEVQVPMLVYEFIPNGTLCNLIHGNHGQNISPVTRLRIAHESAEALAYLHSY

ASPPIIHGDVKSSNILLDVNFMAKVSDFGASILAPINKSQLVTLVQGTWGYLDPEYMQTSLDLIELLTRKNVFNL

DAPENEKSLSMRFLSAMKENKLENILDDQISNNENMEFLEEVADLAKQCLAMCGEDRPSMKEVAEKLDRLIKVMQ

HPWTQQNPEELESLLGESSYIISSGALSTRNFSIEKKVVKDLASGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	410	556	1.7e-28
Ser/Thr pkinase [Pfam ls]	410	679	2.9e-25
Ser/Thr pkinase [Pfam fs]	640	663	0.27

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	389	675	3e-41
FLS2 [A.thaliana]	398	670	2e-27
Rpg1 [Hordeum vulgare]	398	670	9e-18
Rpg1 [Hordeum vulgare]	403	677	5e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	4	26	out -> in
putative TM domain	340	362	in -> out

Report for 5662.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)