Report for 5680.m00135

 > 5680.m00135, length: 521, copies: 1 

MTKLLHSACLLICISGAIGLAAAAAGHPGCQTRCGDVDIPFPFGIGDHCAIHEGFRLECDNATKGTSNQKPFWGD

FEVIKISMEDGKVWVKAYMSRQCYDQSTGGMSYSDASANLSGSSFWLSDTDNKITVIGCKTLAYMTTDSYVIGCS

SACDNKVNKLTPKNGSCSGAGCCQANVPKSIQYYQGYFNEGYNTTKIWMSSPCSYMAVMETAAFNFSTSYLTSSV

FYDTYKGGVPVVYDWAITSKTCTESRRNKTSYACISNNSQCIDNLTNAQGYRCKCSNGYEGNPYIKDGCKDIDEC

LNNATYPCKGICTNTLGNFTCSCSPGSYMMNGDCMPKKKLRFDSVPVVVELQEATNRFNEQQILGQGGHGTVYKG

LLKGNMEVAVKRCMTINEHQKKEFGCCLEVEVPMLVYEFIPNGTLFDLIHGNHGQQISLATRLQIAHESAEALTY

LHSCASPPILHGDIKSSNILLDRNLIAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEYMQLCQLTDKSD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	358	386	2.8e-05
Ser/Thr pkinase [Pfam ls]	358	521	2.2e-07
Ser/Thr pkinase [Pfam fs]	399	485	7.2e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	350	521	3e-18
Pto [L. esculentum]	350	521	3e-25
Rpg1 [Hordeum vulgare]	351	521	7e-18
Rpg1 [Hordeum vulgare]	351	520	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 5680.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)