Report for 5703.m00206

 > 5703.m00206, length: 852, copies: 1 

MAELVVSSAKGAVRSLLGRISTMLVNEAQLLGRVRRDMQFIKDEMEMMDAFLLLLLHQQAGTLDHHYHNQCTPWI

RQAMELARDCQDCVEQYAQCIAAGPSSKSLLLGRLRRVSRLVRSLPERHRLAVQIQDIKVRLGEVSHRRKAYDIC

ANLNSYRPPEQDNGGEQEDEAAWRRYLASAEPPADLKNTVNELVRWLMEDQPAGLRIIPVVGICVDTSAIIAERV

YQHSSVTSLFDCKAWITVRDCQSHLQILKDILCQLVLPLNKFRSEMIGWNEEQLVEKLRCYLRGKIFLIVLHDVR

DESIWSHIKLAFPDDCSAGSAIIITTDDDKVAESFSAYKIFNPDSPGYVLDFFLSKAIALLKHENEKQLRKILPC

MLIHLEPETFFMKMLLRYLYYGRYATLRLRDALQHTSSLHDYWPKNMHQEDQLSKFRTCIVPDLVHDALTDLVAR

GSNITSVDTVLAPPELARHLSIRFSTKLHMSPSEPINSILSFLKSLHSSSRLGLLKVLDLDGCKGLKRRHLKNIC

GIYLLKYLSLRDTDVTRLPKEIENLIYLETLDIRQTKISVFPRKSLVLPMLKHLFSGHTVYPSEDIFRQQESFSA

IHIPHQIGRMKNMEILSHVKVSHGGMQLIAVGQLLKLRKLGVVIHDTDKDGFDSLLHVIGKLNKCLRSLSVQIRS

PSAADGSNGFDMSMMYSTYPRLLESLTICGIKSGLPPWIEHLHQLTKVTLHNTSLTESAIHVLGKLVGLCYLRLR

HRSYIRGDLTISTREFKNLRFLFIEGPDIVNISFDEGAAPRLERMVWRFTRMVSLVGIGHILSIRELELEGDSDL

EKIGVILRDIKAHPNDPSLKHIPAAGN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	171	428	5e-07
NB-ARC [Pfam fs]	221	334	4.8e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	529	551	0.62
LRR [sensitive, ls]	529	551	6.7
LRR [sensitive, ls]	552	574	2.4
LRR [sensitive, ls]	552	574	26
LRR [sensitive, ls]	719	742	1.1
LRR [sensitive, ls]	719	742	13
LRR [sensitive, ls]	813	836	5.1
LRR [sensitive, ls]	813	836	55

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	338	4e-17
Mla1 [Hordeum vulgare].	11	334	1e-17
RPM1 [A. thaliana]	17	332	3e-15
I2 [L. esculentum]	174	332	2e-12
Pib [Oryza sativa].	440	819	3e-17
RPM1 [A. thaliana]	467	819	4e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5703.m00206

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)