Report for 5703.m00207

 > 5703.m00207, length: 972, copies: 1 

MDGFGLSSTHSAVKSLVGRLTDVLSDQVQLLGGLRREVQFIRDEMESMNGFLLNHARRGRMDHQLQAWMNQVKDL

ANHSQYCVDQYLRCLGTTSHRSPGGLWGSVRRLPRFVSTLPARYRLAIQIQDIKIRVVEVSQRQQRYPLHGTATE

QEPQSGMASDHSQQAFLTGDSEADQQEHLRRRILAEDDSGLFKEAADELTSWLTVEGDGRSDLRIIPIVGSRGMG

KTTLAEQVYKGYSSRLADHKAWISVGSNQSPQQVLRDILAQIVGLHANNLQDMGTWGNSQIALMIQEQLEGKRFL

IVLDDVCSESLWKDIEASLHCGNSAPSAILVTTSLPEVAQSFCPYRIYDLRYIQEEHNRSLVDFFLVRAANFISD

NGHGKASLKEEVLRSILVKCSPCIFSMKMLLRFLYANPNKTLQELHDFSNSLCFCSPLHLSSWLSNAEKMLTFCY

NALPCDYRSCLLYLTIFPNDHNIRRTSLLRKWIAEGLIAERDGLSAFDVANRCFDALLAQRFVLPGDVGNSGKVN

SCRVHNLVRDFIAWVIRDDNFVYTKLPVDLAHRLPIHNGERLQQVSRIKLRASHFDDCWSMTRCCFTTKSVDPLA

GISMLLRSIQESAQLGLRLNVLDLEGCKGLEKYHLNSVCKIFQLKYLSLRNTDVSHLPKKIDKLQYLETLDIRQT

QIKAFPGKHFILPGLKHLLAGCTNCPSKKNNLMEKESCSFSTVLMPQKIVRMGKLEILCYAEVSSGLTGLMGICQ

LRRLRKLGVLLQGNAACNLDYLFRQIDMLDRSLHSLSIRMERLKLAKDDARKRDDMVPASFPFSPPKFVQKLNIS

GIRSALLGWIGDLHQLSKITLHETSLTEHVLGILGQLGSLRCLKLQCNSTMGSSLSFRSGAFRNLVALVVQDNNL

LDIIFDYGAAPRLERVILSIAAIDSLSGVQHLQQLKELELHGSARNIGEVEQAIAGHHNNPVFRHEQWNDLH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	174	319	7.3e-15
NB-ARC [Pfam ls]	174	493	2.6e-13
NB-ARC [Pfam fs]	450	493	1.6e-09
LRR [Pfam ls]	643	665	1.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	618	640	4.3
LRR [sensitive, ls]	618	640	48
LRR [sensitive, ls]	643	665	0.1
LRR [sensitive, ls]	643	665	1.1
LRR [sensitive, ls]	666	688	3.5
LRR [sensitive, ls]	666	688	39
LRR [sensitive, ls]	864	891	2.7
LRR [sensitive, ls]	864	891	29
LRR [sensitive, ls]	934	958	3.9
LRR [sensitive, ls]	934	958	43

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	12	920	8e-55
RPM1 [A. thaliana]	17	940	1e-34
Pi-ta [Oryza sativa]	62	677	4e-47
I2 [L. esculentum]	172	871	3e-25
Pib [Oryza sativa].	179	940	3e-45
Xa1 [Oryza sativa]	191	757	2e-12
RPS2 [A. thaliana]	215	676	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5703.m00207

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)