Report for 5704.m00150

 > 5704.m00150, length: 927, copies: 1 

MADQLVIGSVKGVLDTLLGRISTVLADKARLLGRVRRDMQFIKDEMEMMDAFLLLLLKQQASTLDRHHYNKCAPW

IKQAVELAHDCQDCVEQYAQCVAAGRPPSKGLLSHFQRVSRLVRNLSVCHRLASRIQDIKVRLSEVNDRRKTYDI

CPRFDTLSQLWEQDDDGEHGDETAWRRSFAFAEPPANLKKSTVNELIRWLMEDQSAGPRLIPIVGVGVEAGKIIA

ERVYQDSSVAILFDCKAWITVNGAQSHVQILKDILCQVVLPLNKFRSEMDGWNEEELVEKIRCYLRGKIFLVILH

DVRDKLIWDHIKLAFPDDCPAGSAIIVTTDNDDKVAQTFSPYKTFNPDSSGHVLNFFLSRAISLLKHEREGWLRK

ILPCMLIYLEPQIYFMKMLLRFLYYNESGSSSQVYDALGNRGSLHDYWPKKMVELCYFDMPNKYRSCMLYLSIFP

PGYKIRRTSLVRRWIVEGLITDGQEMNALEQADNCFDSLVGRLLLCPSDIDASGKVKTCTVLDLVHDVITDLVSG

GYDTTFVVTVLAPRELARHLSIRFSTKLHISLSEPIDDILTFLKSLPSSSLLCLLKVLDLDSCKGLKRRHLKNIC

GIYSLKYLSLRDTDVTELPKEMEKLIHLETLDIRQTNVSVFPRKSLVLPRLKHLLSGHTVCPSEDIVRQQESFSA

VHIPHRIGKMRNMEILSHIEVSHGGKELTAVSQLLKLRKLGVVFHDADKDGSDCLLHVIGTLHKCLRSLSVQIRS

SSADDGSKGFDMSMMDATLPRFLESLTISGIRSGLPLWIEHLHKLTKVTLRDTSLTESAIHVLGKLVGLRYLRLR

HRSYIPGNLTISGREFRNLQFLLIENSDIVSIRFDEGAAPRLERLVWRFTIMDSLVGIDHLLSFRELQLHGDCDT

EKIGVILHDISAHPNDPSLKHIPAAGN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	173	475	5.7e-11
NB-ARC [Pfam fs]	190	329	4.6e-15
NB-ARC [Pfam fs]	440	475	7e-09
LRR [Pfam ls]	604	626	5.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	604	626	0.5
LRR [sensitive, ls]	604	626	5.4
LRR [sensitive, ls]	627	650	1.1
LRR [sensitive, ls]	627	650	12
LRR [sensitive, ls]	794	817	1.8
LRR [sensitive, ls]	794	817	20
LRR [sensitive, ls]	843	866	3.7
LRR [sensitive, ls]	843	866	40

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	10	919	2e-40
RPM1 [A. thaliana]	14	894	7e-37
Pi-ta [Oryza sativa]	73	711	1e-32
I2 [L. esculentum]	189	654	3e-24
Pib [Oryza sativa].	189	894	1e-32
Xa1 [Oryza sativa]	192	717	3e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5704.m00150

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)