Report for 5707.m00164

 > 5707.m00164, length: 627, copies: 1 

MSQERALDEVVSPFLMQLSKARLLFLKLDEDSSFLEIKHLFQNIEKEAYEVENILQRVSRWENEIIDDFGGIARY

LDDIVEEESHLNSICLKLQIVNAEMSNLKDRMKLPLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKI

LENSTMSTLQLSYDNLDLQLKLCLLCFSIFPENSIISKRAMIHWWIGEGLVAATRNQTAEDVGKDCFDKLIARDM

IEAVHVKRSCSVSECKLHPWIRRMLITVARKAQFFEFDSEGNATWDFSGTHRACLVEEYKQEIEISPVKNQPNTD

GLLTIFNVNERYLQFDKSWFLDLRKIAVLQLGRWHNLYRHHIEVDSTEFLEGLQLSKQIKYLCLRGISRITALPA

SIGELSNLMILDLHACHNLERLTESITSLQMLTHLDVSECYLLEGMPRGIGLLTELQVLKGFVIGGSTSNYNCRV

AELVRLEKLNKLSVYIGSKVAVTGDELNELENIKGLRSLTITWAVSVLSKGKDQQASVATAMLTSLSLPPNLKKL

DLRCFPGKKIPSWLSPSKLLGLKKLYFTGGMLNTFGDGSTSEMWKVEILRLKFLDDLEVEWTQLHEAFPNLTFLE

VFRCSKLESFPCDKDGVWMNCDKQEVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	136	206	1.4e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	138	569	6e-14
I2 [L. esculentum]	139	607	4e-17
Pib [Oryza sativa].	139	410	7e-19
Mla1 [Hordeum vulgare].	159	491	1e-19
Pi-ta [Oryza sativa]	159	434	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5707.m00164

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)