Report for 5709.m00129

 > 5709.m00129, length: 1022, copies: 1 

MESAAQSLVSNVGTLVGQEFNQLRGVGVEVARLRNELATIHALLRMQSEADEAAVDHFAREWLKQLREVAYDAED

CVHLYHFRIRCRSGQLSVWTNCKRLLTTLLARRQLAGDIRALRALASSINEQHCSYGFSLDSLRRSTADAAALGT

MPASARVVVVDADDHDEFVDNNGQATELANKVSALREGVDDDKKRRVFSIVGFGGLGKTMLAREVCRRLETVFHF

QAQVAVSQTFSGKDLQGLLRRVLRQITQPIVDRETVDDAEITQLQAAAASSQPNVNIDTMDVDDLATELKKRLDN

KRILVKKVGPTDSQKSSERFGVPISSFLVDMTFDMTCKCIVFYKNVVYLILIDDVWSIAAWDAIRSKLPVTDSNC

GSRIIVTTRIHTVAKACSAASDYIHHMKKLDDTESKQLFISKAFGSKSPCPDDLKDAMESILKKCSGLPLAIVSI

ASLLANYKPPEGKEMWETIKNSIGSQMENNPTLEGMRQILTLSYNHLPHHLKACMMYLSIFPEDYMIAKDRLLKR

WISEGLIVEKRGLCQMDLAEGYFNELVSRNMVDMVISKATFNLHQGIREDQFRVHDMMLEILVSKSLESNFVSLV

GGQYEGMSYTDHTIRRLSIHGGVEAGKDPSSSSKKMAAHRGTGGDSIKGMMMQHVRSLSIFDPEAHNILSRLGEF

TLLRVLDLEDCTGLTNKHMSCICRMYLLRFLSLRGTDVKVMPSRIGDLEHLQMLDVRQTQLKDLPKSVTKLEKLE

HLLFFDQGDSGWMLPQGINKMKALRQLKKAAVVFDAKVAEEIGALGQLQELAIFVDTGKKMNNGVVKKLASSLSK

MYSLRWLDIGNLDAGKWPFAPIMEFLHDIEPPPQLLRYLRICGHMDRLPDWVESLHDLVELQLRWTHVDGFQLFN

VLCKLPNLKRLFLGIYFIHGKHMVVHSSQHFRELKELILGYTPSSCDVYEFEEGSMPNVERLVVYFGDQTKKIVG

IEHFKKLKEVEYIGSKDNLRPVLEPVEQMNNKRDVSQRITIKVRYDW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	151	537	1.3e-27
NB-ARC [Pfam fs]	348	537	2.9e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	979	7e-77
RPM1 [A. thaliana]	9	994	2e-58
I2 [L. esculentum]	17	986	6e-31
Pi-ta [Oryza sativa]	56	807	6e-57
Pib [Oryza sativa].	122	986	9e-67
Xa1 [Oryza sativa]	197	777	1e-21
RPS2 [A. thaliana]	348	764	8e-20
N [N. glutinosa]	376	888	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5709.m00129

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)