Report for 5717.m00120

 > 5717.m00120, length: 786, copies: 1 

MAVNISTGVMNSLLVKLEEVCRYDLKEIQFSTEFDFKNNIWHLKEELSCMNALLQKLPNMEALNIQKRELRNKVR

ELAYFVEDRIDRFMHSFGTVADKATLLTDTMDLMLPILFEKIHEIKDYVVEEVRRVESIYNLDESISSNPRQIEI

DDISPVLCGKANRLVGINVPCEVITQLLMEDMEGESVQHPKVVSIVGFGGLGKTTLASQVYKKIHSRFECAVFVF

ASRNRSTSMILNDILSQLRYDGSADGIKSLINATREKLSCKRFLVVIDDIASIETWNSISGAFVETWNSGSRIIT

TTRRKDVANACCSSFHGIVYKMKPLGWTDSRSLFFRRIYGSDNYSPELEELIIAIDILKKCGGVPLAVVVIASLL

ASQEEVNKLDNWLKIKYSMGFELERNPNSKWMKHILKLSYNNLSSDLKTCFLYLHMYPENYDIMKKDSMRQWIAE

GFITQKDNRDLEDIAESYFSDLINRSLIKPAQFKHGEVVSCRVVHNLFLDLIVEKSTEENFVTVIRTDQDCLRRH

NFLIRRLSYQSNRGNLIQASESLHQVRSVIYFGDRLHQRGESLPRLQMFEALRVLHLRMEGYFPFRATYDLSPVC

NLFQLRYLKLEGNRFQFPDTSGELRYLQVVDIKCSGDLVLIGGFLSDACLPSLRHLRTPWNAELGRGINRLTSIR

TLEEINFCNCSVENIRHLGMLTNLRTLGVIYNRRRGNDEDDQTDMVKFAALATSLRELGSCNVRCLDFNVALMEH

RQPPIGFLYSWFPPPQFLQKFHPHMIFFFRVPYWIQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	149	310	8.6e-22
NB-ARC [Pfam ls]	149	458	3.5e-45
NB-ARC [Pfam fs]	345	458	1.5e-24

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	3	740	2e-86
I2 [L. esculentum]	43	534	6e-31
Pi-ta [Oryza sativa]	73	702	2e-68
RPS2 [A. thaliana]	113	514	7e-18
Xa1 [Oryza sativa]	118	732	3e-28
N [N. glutinosa]	136	427	7e-15
Pib [Oryza sativa].	138	711	3e-52
L6 [L. usitatissimum]	160	427	5e-12
M [L. usitatissimum]	160	427	7e-14
RPM1 [A. thaliana]	162	722	6e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	59	79

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5717.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)