Report for 5728.m00167

 > 5728.m00167, length: 736, copies: 1 

MTPLLLLLLLPLLLLAPASASTVAIAAGPTACAVAEGNSTVYCASATNSSSSAAVAPFVSFSQVSGGGGAFVCGL

QVGGRALFCWPAAAPGQLRRVYNGPGQLSQLAVGGGHVAAYDAAARVIRWWRGGDRFPLWFGGGFASLVSGDDFT

CAVETSTSAVRCWGPRGGAVEAGFLNASVSALAAGGSRACGVRRNDGGVLCSGGGVLAPREDLLLCWSRDGLVAA

EVNLPPILPGVCVSDNSSCKCGPLPDSGRFCKVSGDVICRRFCDTSPPPPPPSPRTPSPPATPSSRRGVSKGWIA

FAVVGAVGCFAGLCSIVYCLLFGFCSHKKVHNSVQPNIASNNNGGGGGGAAAAVGSGAPSPYGSPNGSLGRLRRQ

LSRVMTRQRSGPSSFKDPAEEFTFAQLAAATKDFAAEAKIGEGSFGTVYRGKLPDGREVAIKRGESGPRARKFQE

KETAFRSELAFLSRLHHKHLVGFVGYCEESDERLLVYEYMKNGALYDHLHPKPNGSSSPSPSPVATSWKLRIKIL

LDASRGIDYLHSYAVPPIIHRDIKSSNILLDGSWVARVSDFGLSLMGPETEEVKHLSMKAAGTVGYMDPEYYGLH

HLTVKSDVYGFGVVMLEALTGKRAIFKEAEGGSPVSVVDYAVPSIVAGELSKVLDARAPEPSAHEAEAVELVAYT

AVHCVRLEGKDRPAMADIVANLETAVALCEDSATGGGAAGHGNSSSSASLSITSMELSRMD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	409	626	4.2e-44
Ser/Thr pkinase [Pfam ls]	409	699	8.3e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	393	710	4e-22
FLS2 [A.thaliana]	395	697	4e-33
Rpg1 [Hordeum vulgare]	396	697	4e-32
Pto [L. esculentum]	397	705	7e-53

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	53	75	out -> in
putative TM domain	297	319	in -> out

Report for 5728.m00167

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)