Report for 5786.m00122

 > 5786.m00122, length: 816, copies: 1 

METILAGYTKDVVRSLGELAANEIAKVLCVKNEINKLKRKLETMSAIIRDAEQTVVQYETTRDWLKQLRGIAYEA

ENIIDRCRIEQERLQMFQPQECNPSSLFKCCRDVAVDYIIANDIHELNQELESIRSESTLLHLNPVAEDQIRLDL

DVAPHLEPDIVGREVENDSDNLIQLLTRDYNTTCPLFAIIGTIGVGKTTLARKVYHKAAAMFETRLWVHVSKDLR

HLTMWSDGMFSKAEIAEQQALLLSYLQDKRFLLVIDDVWGENVWDGRLEIQAQHGAPGSRVLVTTRDERVARRMG

AIHLHRVKMLNEDDGWWLLRTRAFLDEGAGNMQDMGRRIVQKCNGLPMAIRRIGCHLRDVDHKEDEWGRVYSSDF

CGISARIRSTINMSYLELPYYLKRCFLYCALYPEGSVIERQCITQQWIAEGFIVTQTNSTQRHSATVEEEAERCY

DELLGRGLLLPENEACDVVGSKMPHLFRSFALLQSQDENFTGNPQDIGDVFKPCRLSVTNGGVESIRNGLKKLRN

LRTLLLSGGTLNDRALSDIFLKFTHLRVLDLGNTQIDCVTASLGRMAHLRYLSFANTQIREIPGSIENLRMLRFL

ILRNCIRLNSLPESVGRLKNLRSLDMSGAGLNIVSFKFSQMRELNCLQGFLELSSLSKLTSLQMLRIERELNAEG

AKQSALREKRHLKELELCCSIDEQTTQIGRAENIKDVFEELAPAPSVVSIKMANYYGHEFPSWLSFPGLSELQRL

TIDGCSHCSQLPSLGQMSNLKYLAIIDSNLSATIGPELRGKPDNGVAFPKLEQLLISEMSNLKSWS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	143	433	7.7e-47
NB-ARC [Pfam fs]	194	433	1.2e-49
LRR [Pfam ls]	573	595	0.23

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	525	549	1.4
LRR [sensitive, ls]	525	549	29
LRR [sensitive, ls]	550	572	0.73
LRR [sensitive, ls]	550	572	15
LRR [sensitive, ls]	573	595	0.011
LRR [sensitive, ls]	573	595	0.23
LRR [sensitive, ls]	596	619	0.6
LRR [sensitive, ls]	596	619	12
LRR [sensitive, ls]	620	642	0.55
LRR [sensitive, ls]	620	642	11
LRR [sensitive, ls]	746	768	0.69
LRR [sensitive, ls]	746	768	14
LRR [sensitive, ls]	769	792	2
LRR [sensitive, ls]	769	792	41

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	668	6e-47
RPM1 [A. thaliana]	22	812	1e-40
I2 [L. esculentum]	34	815	3e-69
RPS2 [A. thaliana]	62	814	7e-34
Pib [Oryza sativa].	147	628	2e-33
Pi-ta [Oryza sativa]	151	659	9e-32
Xa1 [Oryza sativa]	157	816	1e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	30	59

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5786.m00122

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)