Report for 5797.m00161

 > 5797.m00161, length: 615, copies: 1 

MEKSKVVVFAGRVLAIVALLLACCCMAAAAQGGEGARVRESLIGFLTELAGGDKERARGIGWDASGEPLTHIYVG

DNRLSGSLPPSLAELASLHVLNVSRNSFSGEIPAELSKLGLVRFCVNDNRFNGAIPEFELSRFEHFSVANNNLTG

PIPDDAGDFGRDSFSGNSDGLCGRPDFPPCPPPPSSGENDGKRRRRARTIVMCLGYVLLGAGVAAFVLYMMCSKR

RRRPSGVGGKTAATTETSSSVTPGKSAYSLPMSEERMNATAAAAAAVARATPASLVVLQRSGTAASTVMTLNTAA

AAAAEAARKLRFEDLLRSPAELLGRGRFGSAYKVVVPGGAALAVKRVKDAAGAEEEEEFRRRMERVGKARHPAVL

PPLAFYCAMQEKLVVYEFLGHGSLAKLLHGSIESSQVALDWPARLHIASKVADGMAFMHGALRGGDGDGDGANAN

LSFSSSYEEDEAGGAIAHGNLKASNILFTATMEPCISEYGVTAPPPPSSAPAAALRADVRAYGVLLLELLTGKAT

AADGAELSRWVTAVIREEWTAEVFDRAMLSSAGAGGDTVASEQRMVRLLQVAMRCIDDASSPSPPPTMREVAGMV

NAIREEDDMSLSSEA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	92	115	0.087
Ser/Thr pkinase [Pfam fs]	317	487	3e-08
Ser/Thr pkinase [Pfam ls]	317	600	1.8e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	68	91	0.23
LRR [sensitive, ls]	68	91	5.8
LRR [sensitive, ls]	92	115	0.0034
LRR [sensitive, ls]	92	115	0.087
LRR [sensitive, ls]	137	168	0.55
LRR [sensitive, ls]	137	168	14

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	67	606	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	10	29	out -> in
putative TM domain	199	221	in -> out

Report for 5797.m00161

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)