Report for 5801.m00087

 > 5801.m00087, length: 930, copies: 1 

MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQQVKIWASEVRELSYD

IEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVMKDIMDQVKKVSERRDRYIVDDNAARPTVVDVDSR

LEAMYRKATELIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLN

PDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIV

TTRNKVVAEHAGSGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPR

NSEEWDKVNKSISLGLENNLDVDKMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWGWLAEGFITDET

RPVGTSLQEIGESYFNELINRSLIQPMSEDNFWDEDGKVHVFWDEDGKVHACKVHDMVLELINQLSVEEDFVTTY

LSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGM

DKNHLNHLDKLRLLRFLRLGHYSATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGR

VKLAQGLMLGNMKSLQELVIEATRKVIKEIGNLTELRTLRIVFGSEKTFELKESIQTSIQRLTNLQDLDLRNNIS

FEEIIDMQQVPSGLQRLFMPDSFMKAFPCWINSLMLSHLTTLSICLDFEYLQSDHLDRLAELPSLRFLRLQLAFV

SEQLQEKLTIHRGACAFRSLKDFQFYSSMMPSFQPGAMPHLERLYLSIWTRLRRGGLNDLGLENLYSLRHATIYS

FDDDSKAVIEEALKDYPNQAALKIQSMMMN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	146	451	6e-68
NB-ARC [Pfam ls]	146	451	1.7e-68

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	925	1e-147
RPM1 [A. thaliana]	3	894	5e-69
I2 [L. esculentum]	5	850	7e-49
Pi-ta [Oryza sativa]	25	641	3e-76
Pib [Oryza sativa].	62	330	9e-14
Pib [Oryza sativa].	109	675	1e-65
Xa1 [Oryza sativa]	110	642	5e-27
L6 [L. usitatissimum]	121	821	3e-13
M [L. usitatissimum]	160	745	1e-19
RPS2 [A. thaliana]	171	680	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	27	52

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5801.m00087

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)