Report for 5804.m00117

 > 5804.m00117, length: 461, copies: 1 

MVATTAIVGATTGVMKPLLSKLTKLLGEEYAKLKGVRKQIKFLIDELSTMSAALEMLADSDQQLNPEMRDWRDKL

RELAYDLEDCIDDFMSRVDHDGEKMGFRKFFRKLKKLKARHEIANEIEELKIRAIEASERHKRYNFDQLAHNSST

FGIDPRLSAFYEEVDKLVGIDGPKKRIIELLAMEMKGSLKVVSIVGCGGLAFVSVSQRPDIKKILNDIAEGVGIS

SRTPVGNDEKKLINILREHLKNKRYFVVIDDLWDAKAWKIIELALLNNNCGSRIITTTRSVTVASCCSSQVGYIY

EMKPLSFNESKWLFLKRTFDYENSHYPHPENILDKILRKYGGLPLAIITISSLLLDQHEIDEWHRVLNTIGCGLA

NDPNAETMSNILSLSFFNLPHYLKTCFMYLSVFPEDRKIKKRHLVSKWIAEGFIHRHIKVQLLEGLLTICHSYKW

CLTICHKAHMS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	152	434	4.1e-40
NB-ARC [Pfam fs]	201	434	2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	6	430	9e-45
Mla1 [Hordeum vulgare].	12	430	6e-82
RPM1 [A. thaliana]	19	429	1e-35
Pib [Oryza sativa].	50	314	5e-12
I2 [L. esculentum]	58	429	7e-28
Pib [Oryza sativa].	156	428	2e-27
Xa1 [Oryza sativa]	177	429	4e-14
RPS2 [A. thaliana]	234	429	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5804.m00117

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)