Report for 5805.m00121

 > 5805.m00121, length: 870, copies: 1 

MEERVQWYQYYSVVRSNWLKTMSWYEPTVLDCNIRRRSLYCCFFSLFLAPYSPVRIGSGRLKAKRKCFAFSWSVS

QKPQNDFVKEEIQHLQSDLWQLQTTLPKMRNLVEILEWQIYKKPAAELLPHIKDALLDAEDIIDEFNYYELKAKI

EGRIEECLTSSGCQEFYMSVIRGSFNRVKEIQEKLDHLHRQSMDLGLHCAAQRFDKIVRPETSSFLNSQIFGRQE

EEKMVLELLGVQLQANAGYKRKRSSRVEVLPIVGLGGVGKTTLAQQICKNQMVKAHFDMILWACVSDDFNAKRLT

KEVIQSSKKETSFDNLDSLQSILKDTVELKRFLLVLDDIWDDVMADGGQDWQRFCAPLSNALQGSMILITTRSQK

VADKSELWKLEQDRTDILPALRLSYMYLPPHLKRCFSFCAVYPKDYRFEKDTLVDIWLAEGFVEHASSFPTVTVV

QQYFEELLSRSFFQKVTHGKYVIHDLMHDMAQLVSQDECFIIRNANDLRTIPSNVRHLSIFTKRYIGCHDLMGLC

RSLPCDFGNLISLRKFRAKNFSYLPGEDSRMQFLRGERIKVLKYVNQVQGSLLVNLPGLKSKKNIGLTVLKKENN

LYSLHISQFAEDARYEQEQLEVCENLHPHPDLQHLEVTGYQGENFCPSWFLPDNLPNMISLIFEECHNAKKISLH

RLPCTGFQYLINLYIIECTNLSSIEQFLQPCHIPAIKMISIKGCQELSLISAERFGGFRFLEALVIRDCPRISWE

NGLALPPTLTSLSLVRCGDISKWIPDCLLNLSSLVRLQLVGLSGTMFIPGSIWRNNLPLLDYLEICNFQELRFTG

VPEAIEEINNVLIDKCPMLKELKQPFSRGDVTFLWGIPTSKWYLS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	204	443	1.9e-14
NB-ARC [Pfam fs]	252	378	2.4e-28
NB-ARC [Pfam fs]	383	443	2.9e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	94	377	4e-31
Xa1 [Oryza sativa]	180	377	1e-24
RPM1 [A. thaliana]	254	410	9e-13
Xa1 [Oryza sativa]	262	512	3e-22
I2 [L. esculentum]	336	859	1e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5805.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)