Report for 5836.m00149

 > 5836.m00149, length: 627, copies: 1 

MESAISHRQGEVALIRSKCSMTDHYYAPLRLILLLILSATCFGSELDVQCLKTIFQSVTDPNGILKSSWSFVNNG

TPGYICKFTGVECWHPDENRVLSLRLGNLGLQGPFPAGLQNCTSMTGLDLSSNNFTGLIPQDISQQIPYLTSLDL

SYNRFSGQIPVNISNMTYLNTLNLQHNQFTGQIPLQFNLLGRLTSFNVAENRLSGPIPNNLNKFPSSNFAGNQGL

CGLPLDGCQASAKSKNNAAIIGAVVGVVVVIIIGVIIVFFCLRKLPAKKPKVEEENKWAKSIKGTKTIKVSMFEN

PVSKMKLSDLMKATNEFCKENIIGTGRTGTMYRAVLPDGSFLAVKRLQDSQHSETQFTSEMKTLGQVRHRNLVPL

LGFCIAKRERLLVYKHMPKGSLYDQLNQEEGKDCKMDWTLRLRIGIGAAKGLAYLHHTCNPRVLHRNISSKCILL

DEDYEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELITGERPTHVST

APENFRGSLVEWINYLSNNALLQDAVDKSLIGKGSDGELMQFLKVACSCTISTPKERPTMFEVYQLLRAIGEKYH

FSAEDDLMMLPPLSTDGETLDELIVAQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	119	143	5.5
LRR [Pfam ls]	144	167	0.054
LRR [Pfam ls]	168	191	4.4
Ser/Thr pkinase [Pfam fs]	317	522	1.9e-36
Ser/Thr pkinase [Pfam ls]	317	592	5.1e-34

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	95	118	2.8
LRR [sensitive, ls]	95	118	76
LRR [sensitive, ls]	119	143	0.2
LRR [sensitive, ls]	119	143	5.5
LRR [sensitive, ls]	144	167	0.002
LRR [sensitive, ls]	144	167	0.054
LRR [sensitive, ls]	168	191	0.16
LRR [sensitive, ls]	168	191	4.4
LRR [sensitive, ls]	192	215	0.27
LRR [sensitive, ls]	192	215	7.4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	30	211	9e-13
Xa21 [O. sativa]	43	219	5e-18
Xa21 [O. sativa]	64	404	9e-23
FLS2 [A.thaliana]	70	605	8e-60
Xa21 [O. sativa]	81	216	8e-11
Xa21 [O. sativa]	94	210	4e-12
CLV2 [A. thaliana]	95	216	1e-13
FLS2 [A.thaliana]	98	212	1e-10
FLS2 [A.thaliana]	99	211	2e-14
FLS2 [A.thaliana]	99	218	2e-11
FLS2 [A.thaliana]	99	211	5e-11
FLS2 [A.thaliana]	106	218	4e-13
FLS2 [A.thaliana]	106	211	1e-11
Cf-9 [L. pimpinellifolium]	123	230	7e-12
Pto [L. esculentum]	284	588	1e-41
Rpg1 [Hordeum vulgare]	310	595	5e-26
Rpg1 [Hordeum vulgare]	314	596	7e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	243	265	in -> out

Report for 5836.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)