Report for 5837.m00136

 > 5837.m00136, length: 798, copies: 1 

MTPLLLLLLLPLLLLAPASASTVAIAAGPTACAVAEGNSTVYCASATNSSSSAAVAPFVSFSQVSGGGGAFVCGL

QVGGRALFCWPAAAPGQLRRVYNGPGQLSQLAVGGGHVAAYDAAARVIRWWRGGDRFPLWFGGGFASLVSGDDFT

CAVETSTSAVRCWGPRGGAVEAGFLNASVSALAAGGSRACGVRRNDGGVLCSGGGVLAPREDLYVDGLAVGDSHA

CGLLRPNHTAACWSLGGATTTLYYPAVGTAFELLVAGGNLTCGLVSANFSLLCWSRDGLVAAEVNLPPILPGVCV

SDNSSCKCGPLPDSGRFCKVSGDVICRRFCDTSPPPPPPSPRTPSPPATPSSRRGVSKGWIAFAVVGAVGCFAGL

CSIVYCLLFGFCSHKKVHNSVQPNIASNNNGGGGGGAAAAVGSGAPSPYGSPNGSLGRLRRQLSRVMTRQRSGPS

SFKDPAEEFTFAQLAAATKDFAAEAKIGEGSFGTVYRGKLPDGREVAIKRGESGPRARKFQEKETAFRSELAFLS

RLHHKHLVGFVGYCEESDERLLVYEYMKNGALYDHLHPKPNGSSSPSPSPVATSWKLRIKILLDASRGIDYLHSY

AVPPIIHRDIKSSNILLDGSWVARVSDFGLSLMGPETEEVKHLSMKAAGTVGYMDPEYYGLHHLTVKSDVYGFGV

VMLEALTGKRAIFKEAEGGSPVSVVDYAVPSIVAGELSKVLDARAPEPSAHEAEAVELVAYTAVHCVRLEGKDRP

AMADIVANLETAVALCEDSATGGGAAGHGNSSSSASLSITSMELSRMD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	471	688	4.2e-44
Ser/Thr pkinase [Pfam ls]	471	761	8.3e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	455	772	4e-22
FLS2 [A.thaliana]	457	759	4e-33
Rpg1 [Hordeum vulgare]	458	759	4e-32
Pto [L. esculentum]	459	767	7e-53

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	53	75	out -> in
putative TM domain	359	381	in -> out

Report for 5837.m00136

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)