Report for 5883.m00141

 > 5883.m00141, length: 812, copies: 1 

MQAFLRAAEVMKKKDELLKLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQS

ARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSF

HRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRNFSSVVGRLIHFHRFQQLSTVSLPLP

LDPALPPPKLTGVCAAARTSATGRLELGIIGIIHLPRLKEISLEYRSKVARFAQLEGEVCAHPKHPVLQMMEDRS

YRDLGDRHSSSWFDQVIISSSIGISGRPWLPASVAPSRGADLRRHPLFSIASQLFARMSERACVHGRDIEEWEIL

YAQLPSELGCNPSLAAMKKVVALSYNYLPSHVKPCFLYLCIFPEDFDVQRKRLVHRWIAEGFVRAKGGEFWWDGD

GELRKELPPFQYLGRDRRQGSYYDLDTYNRKERVLILSCIPLIMALSDSDNHRRLITDLHTGCSSHWHRIKDGVR

VPRGIKNLKRLKVLEIVDIAVTDSKAIQELGELNQLRKLSVMTKGSNKKKCKILCAAIEKLTSFKSLYVDGDHGY

SLDGTLECLDSISHPPSLKSLRLKGCIKETPNWFRELKHLVKIYLYKSHLNGDTMEILGELHNLMDLHFRWYAYV

GEKLVFIEGAFQNLRKLVVETEDKLREVRFEEGTSPQMEWIEICHCELISGIVGVKHLPRLKEIGLKSAKVARLG

QLEGEVDTHPNRPILRLSEKRSYHDLGETHVSVVEVEVADEPLLTSSLWTLTIEQQPVSPAL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	68	174	4e-19
NB-ARC [Pfam ls]	68	443	1.1e-10
NB-ARC [Pfam fs]	369	443	1.3e-17

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	11	177	4e-11
Pib [Oryza sativa].	23	175	3e-13
Pib [Oryza sativa].	370	444	2e-14
Mla1 [Hordeum vulgare].	371	598	7e-14
RPM1 [A. thaliana]	512	755	8e-12
Pib [Oryza sativa].	521	741	1e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5883.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)