Report for 5883.m00145

 > 5883.m00145, length: 993, copies: 1 

MHDPVQYCLHAESATNLTTHLIGLVNEKSRYFIVAHGFVDRIGILDWSVFGEGEESIQSMAETVLSMARSLVGSA

ISKATSAAAHEASLLLGVQKDIWYIKDELKTMQAFLRAAEVMKKKDELLKVWAEQIRDLSYDIEDCLDEFKVHIE

SQNLFYQMVKLRKRHLIATQIRNLKSRVEEVSSRNSRYNLVKPISSSNEDDMDCYAEDIRNQSTSNVDETELVGF

SDSKIRIELLKDMIRQFLGSNSLDQVLQELQGKMVVQIPHLSDYLRKKLKEKRYFVVLDDLWSLDAWNWINDIAF

PKNNNKGSRIVVTTRDVGLAEKCTTTSLVYHLEHLQMNDAITLLLRKTNRTHEDMGTNKNMQKIVEQIVNKCGRL

PLAILTIGAVLATKQVLEWEKFYKQLPSELESNPSLQALRRMVTLGYNHLPSHLKSCFLYLSIFPEDFEIKRSRL

VDRWIAEGFVRAKVGMTTKDVGDSYFNELINRSMIQRSRVGIEGKIKSCRVHDIMRDITVSISREENFVFLPVHD

GSNLAQENTRHIALHGSMSCKTGLDWSIIRSLAIFGDRPNNLAHTICSNKFRMLRVLDLEDVKFLITQKDFNNIA

LLRHLKYLSFGRIFSSCIYTLPRSIGKLHGLQTLNMSSTYIATLPTEISKLQCLRTLRCTRVSNNNNFSINHPVK

CLTNTMCLPNIFTPSVSSDNRAKQIAELHMATKSCWSESYSVKVPKGIGKLGELQILEHVDIRRTSTSAIQELAQ

LSKLTKLSVTTKGSTEEKCKILYRAIQRLCSLQSLRVDAEGSSGNGTLKCLDSISYPPLLLKTLKLYGDLEEMPN

WIEQLSHLMKFYLLGSKLKEGKTMLILGALPNLMLLCLSLDAYLGENLVFRTGAFQKLRTLWFDKLDQLREIRFE

NDSSPLLEKIGIRYCRLEIGIIGISNLMRLKEITLGYRVKVGYLGQLEREVGTHPNRPVLRMEEDRSCHDLRRDG

KGSAVEMEATEPLPEPES

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	206	465	9.8e-22
NB-ARC [Pfam fs]	270	465	8.1e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	60	768	1e-48
Mla1 [Hordeum vulgare].	65	958	8e-68
RPM1 [A. thaliana]	67	935	3e-68
Pib [Oryza sativa].	107	354	2e-15
I2 [L. esculentum]	224	657	7e-32
Pib [Oryza sativa].	230	935	1e-90
Xa1 [Oryza sativa]	266	762	1e-22
RPS2 [A. thaliana]	272	661	7e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5883.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)