Report for 5899.m00195

 > 5899.m00195, length: 557, copies: 1 

MKRKRRRRRSGKGNVPPSSPPTAILAAVFVDSDQTVDLVHPSLGVRKLHAVVADRVSLVPQQILASLARPRRARR

VPHNEGTDLTATIAREGFDSYVLAVLRRSHRECRGGRSRPGKKAVAATAGDRARHPEAPPPDGSGLPGLDPLAGG

DIDECALPGIMSNCSFNSVCVNRPGGFDCPCKRGMTGDGKRGTCTENFPPAAKAAVGLSSFIVFIVLIFMVKQHL

KLKKFYEQNGGPVLKGVRNIKIYTKKELKQITSNYSSDIGEGASGKVYMGTLKGGQQVAIKKSKKVDEERKSEFT

QEVILQSEMKHKNIIQLFGCCLEVDVPMLVYEFTVKGSLHDVLFKCDENMKGNLHDVLPKYNDNKKGKGKGKGKV

HDALVECDGNKNVSLHDVLFKCGDKIAIDTLLEIAIGSAEGLTYMHTARETPIRHGDLKSGNILIDNNFVPKISD

FGTSRSLVAGHKFRPDKFIPADMNYIDPVYMEDGMLTEKSDIYSFGIVLIELVTRKPAKYDDDRSYVRNFIQAYL

DKREREKCHKEITPDVEINILEMNLSRINALI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	258	347	3.2e-19
Ser/Thr pkinase [Pfam ls]	258	557	2.5e-24
Ser/Thr pkinase [Pfam fs]	387	458	3.4e-11
Ser/Thr pkinase [Pfam fs]	479	507	0.00029

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	206	515	2e-19
Rpg1 [Hordeum vulgare]	248	506	8e-13
Pto [L. esculentum]	251	508	6e-30
Rpg1 [Hordeum vulgare]	253	506	2e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	204	221	in -> out

Report for 5899.m00195

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)