Report for 5905.m00154

 > 5905.m00154, length: 892, copies: 1 

MRRCSCWQLLWLVLVCSWRIAAAQAQAAPRTDPTEAAALNTILGRWGKKASSEWNISGELCSGLASDKTNWDDYP

NINPFIKCDCSYNNNSVCHIIKLRVYKLNVVGQLPSELQNFTYMEDLNLAFNPLSGQLPKEIGNLTNLLMLGVSF

NNFTGELPEELGNLVKLEQLRAQDNDFTGKIPDNFGSMSSLEDMRIGDIVNGSSSLAFISNLTSLSNMILRNCRI

SGNLGLVDFSKFANLTYLDFSYNQLSGRFPSWVNQNNLQLNLVANNFVLVGTNSSILPSGLGCLQQDTPCFRGSP

EYYSFAVDCGSNSSTSASDNTIFEADPTSLGTAAYYVTSQTRWGVSSVGNFFQGTNGMDRIYSSSKHFQNTVDSK

LFETARMSPSSLRYYGLGLENGNYTVLLQFAEFSFTETPTWQSLGRRVFDIYVQGALKEKNFDIRKTAGGKSFTA

VNRSYTATVSKNFIEIHLFWAGKGTCCVPTQGHYGPTISALSITPNFTPTVRNGVPKKRSKAGAIVGIVIGASVL

GLAALFGIFFLVKKRRTMAQQRKELYDLVGRPDVFSSAELKLATNNFSSQNILGEGGYGPVYKGKLPDGKVVAVK

QLSESSHQGKSQFVTEVATISAVQHRNLVKLHGCCIDSKSPLLVYEYLENGSLDQALFRDTGLKLDWTKRFEIIL

GIARGLTYLHEESSVRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKKTHISTAIAGTFGYLAPEYAMRGRLT

EKADVFAFGVVALETVAGRSNIDNSLEESKVNLFGWAWSLYEKEQALEIVDPRIKEFSRDEALRVIHVALMCTQG

SPHQRPPMSKVVAMLTGDVEVAEVIMKPSYITEWLHREGDSSYFTNYAGSATPEFSGHKESELSFIS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	118	141	4.7
LRR [Pfam ls]	142	165	2.3
LRR [Pfam ls]	166	189	0.69
LRR [Pfam ls]	239	262	1.3
Ser/Thr pkinase [Pfam fs]	572	768	1e-52
Ser/Thr pkinase [Pfam ls]	572	842	7.6e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	94	117	2.4
LRR [sensitive, ls]	94	117	66
LRR [sensitive, ls]	118	141	0.17
LRR [sensitive, ls]	118	141	4.7
LRR [sensitive, ls]	142	165	0.084
LRR [sensitive, ls]	142	165	2.3
LRR [sensitive, ls]	166	189	0.025
LRR [sensitive, ls]	166	189	0.69
LRR [sensitive, ls]	214	238	1.6
LRR [sensitive, ls]	214	238	45
LRR [sensitive, ls]	239	262	0.048
LRR [sensitive, ls]	239	262	1.3

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	52	273	2e-14
Xa21 [O. sativa]	89	277	7e-14
Cf-9 [L. pimpinellifolium]	90	281	1e-13
FLS2 [A.thaliana]	95	271	2e-16
Xa21 [O. sativa]	95	287	6e-19
FLS2 [A.thaliana]	98	290	1e-16
FLS2 [A.thaliana]	98	271	5e-16
FLS2 [A.thaliana]	104	289	1e-16
FLS2 [A.thaliana]	104	272	9e-13
FLS2 [A.thaliana]	104	184	3e-11
FLS2 [A.thaliana]	105	287	1e-14
CLV2 [A. thaliana]	107	258	6e-14
FLS2 [A.thaliana]	107	290	6e-17
FLS2 [A.thaliana]	107	293	3e-16
Xa21 [O. sativa]	107	282	2e-15
Xa21 [O. sativa]	107	293	4e-13
Xa21 [O. sativa]	107	284	9e-12
Xa21 [O. sativa]	507	661	2e-11
FLS2 [A.thaliana]	510	840	2e-40
Pto [L. esculentum]	560	851	2e-56
Rpg1 [Hordeum vulgare]	560	841	1e-38
Rpg1 [Hordeum vulgare]	560	837	8e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	515	537	out -> in

Report for 5905.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)