Report for 5913.m00125

 > 5913.m00125, length: 722, copies: 2 

MAEADHGGEKPIAHALRDALFQFVVKSRKLASPMLRALGRASTGPVTVGDDELAALRSMLRRVHAALRDAERLSV

ADHSARLWLAELGDLEYRAEDVFEELEYECRRAAQLEDLKIDLLRAVGAAPTTGKRKREVAQLFAAAPAARLRRK

IDDIWARYGEIASDRKRLRLRPGDGAARRPAAGALVPSSSLPRGEIHCRERDLQRVTDLVCRCKPDGGRNYAVVA

IVGMAGVGKTSLAQHVCSEEAVASQFDLNLWAWVSQEFDVIGMTAKIVEAITRARPDCSELNALHGTMVEHLAGK

RCLLVLDDVWDDNPIHWDTITAPLSCCAPGSTVVITTRSKMVAKMVTPNVYHLDCLSDEHSWYMCRRRASRGGAT

IDDELASIGQQIAKKCRGLPLAAEAAGTTMNTSVTREHWNHVLESNLWADNDEAKNNVLPALKVSYDHLPAPLKR

CFAFCSLFPKSFVFDKDALVQLWTAQGFIKTRGECRPEDVGAGYFYDLVARCFFQLSPSHGIGKGKYVMHDLYQE

LAQFVSGHECRMIHQLNLTGADKTTRHLSIVHDESNSDKELLLKSFCSPDLRTFLFLARMEQVIRGEMPYRRKIV

PCGLVTDFECLRVLGLSNTDIVEVPKSIGSLIHLRYLGLDNTGIQMLPESVGALFHLQTIKLNHCSSLTQLPQGI

KLLLNLRCLEIAHSNVQMPSGIRVLTSLQKLPIFKGCSVQGTILQPF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	180	484	2e-53
NB-ARC [Pfam fs]	220	484	2e-57
LRR [Pfam ls]	610	632	5.6
LRR [Pfam ls]	633	655	6.3
LRR [Pfam ls]	656	679	5.9

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	610	632	0.27
LRR [sensitive, ls]	610	632	5.6
LRR [sensitive, ls]	633	655	0.31
LRR [sensitive, ls]	633	655	6.3
LRR [sensitive, ls]	656	679	0.29
LRR [sensitive, ls]	656	679	5.9
LRR [sensitive, ls]	680	701	0.75
LRR [sensitive, ls]	680	701	16

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	53	706	7e-75
Mla1 [Hordeum vulgare].	77	719	1e-35
Pi-ta [Oryza sativa]	77	706	4e-28
Xa1 [Oryza sativa]	145	709	7e-63
Pib [Oryza sativa].	199	689	3e-28
RPM1 [A. thaliana]	223	706	1e-43
RPS2 [A. thaliana]	223	689	4e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5913.m00125

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)