Report for 5916.m00127

 > 5916.m00127, length: 646, copies: 1 

MAPSPVILVMAALFLQAATMAATTALTVSLPGCPSSCGSMVIPYPFGVGAGCHLAGFAVTCNRSYHPPKLFLRDA

DAAEVLEISLLNSTVIVSSAVRYDAAKGEGAWGRGLAGAFRLRERRNRLVVVGCNLQAVLLDGDDIAAACTTICG

GAGATWPAAADGELADYSCAGVGCCQASIYLGLTSYGVRLSPFGTSTGPPPPPPTSSASSSNQSDSALVFVADNE

WFGGNASKLGSAAATMRPGGGGMPVALAVLDWAIGKSGCPPHGPDDTACSSSNSYCRNSTSTSLGGYSCQCDNGY

QGNPYVANGCQALLVAIGGTIGIGIPSVFVIGMAMTNMIKARRAKKLRAVFFKQNRGLLLLQLVDKVIAERMVFT

LEELEKATNRFDEMRKLGSGGHGTVYKGTLPDRRVVAIKKSNITVRKEIDDFINEVVILSQINHRNVVRLFGCCL

ETQVPLLVYEFISNGTLSDHLHVEGPTLLSWKNRLRIALEAASALAYLHSSASVSIIHRDVKSANILLDGRLTAK

VSDFGASRGIPVDQGGVTTVIQGTFGYLDPEYYQTSRLTDKSDVYSFGVILVEMLTRKKPTVFESSDNVSLIALF

NLLMVQDNIYEILDPQVDTEDVQFCYFQRLVPSPCHIGYLDTNLEY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	386	609	2.5e-51
Ser/Thr pkinase [Pfam ls]	386	627	1.2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	371	584	1e-23
FLS2 [A.thaliana]	374	593	9e-37
Pto [L. esculentum]	374	587	2e-46
Rpg1 [Hordeum vulgare]	374	584	6e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	39	61	out -> in
putative TM domain	313	335	in -> out

Report for 5916.m00127

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)