Report for 5924.m00159

 > 5924.m00159, length: 842, copies: 1 

MDADGFLSIDCGLEGDKNGYTDNSNGIVYTPDGAPYVDTGVTNNVSAQYVNTWDRALNTLRSFPLTLFGERNCYA

LPTVPGAIYLVRLRFAYGNYDNMNSESVQFDLFLGVNKWDEVYIANKDKEYSSEAMFVAWASWASVCLVNTYQGT

PFVNTVELRQLDSMLHFRKIMGNSSIYLYERRNMGPSSRDNPIIRYPNDTYDRFWYPWGSEDDPTYSNLSAPSTL

IIPPSPSYAVPSPVLETAVVPADNNKSVLSIIQTNDKEIHEYLVLVHYADFQSTLQRQFQAYSNGDPIQGTGGPY

VADYTGQTVGTIDWISAETSGKYNITLAATDSSQLPPIVNAFEVYGRIPLDNPSTFPTDYTCKIISLAYNKLNRW

IKELRLIKVPHKVDAIMTIKFEYGIKKNWMNDPCFPSNLVWNGVRCSTGSDNTMRIISLDLSNSNLHGSISNNFT

LLTALEYLNLSGNQLSGTIPSSLCENNAGSFVFRFSYLFNVDIGDNFVHLDSTYGPEFLNAPGSTKNHWDHMQKT

ENRRFTYEELEKYTDNFERLIGHGGFGQVYYGCLEENIEVAVKMRSESSQHGLDEFLAEVQSLTKVHHRNLVSLV

GYCWENDHLALVYEYMSGGNLCDHLRGKISVGESLNWATRLRILLEAGQGLDYLHKGCNLPIIHGDVKTNNILLG

QNLKAKIADFGLSKTYHSDTQTHISATAAGSVGYIDPEYYNTGRLMESSDVYSFGVVLLEVVTGEPPIIPGHGHI

VQRVKQKIVTGNISSIADARLDAYNVSSMWKVVDTAMMCTADVAAQRPVMATVVAQLKEGLALEEAHEERVDLEN

IASDIVSSVSTFGPSPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	430	453	3.2
LRR [Pfam ls]	454	478	0.0044
Ser/Thr pkinase [Pfam ls]	540	800	3.3e-35
Ser/Thr pkinase [Pfam fs]	541	742	2.2e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	430	453	0.13
LRR [sensitive, ls]	430	453	3.2
LRR [sensitive, ls]	454	478	0.00017
LRR [sensitive, ls]	454	478	0.0044

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	431	820	3e-33
Pto [L. esculentum]	514	816	7e-52
Rpg1 [Hordeum vulgare]	526	836	2e-33
Rpg1 [Hordeum vulgare]	530	740	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5924.m00159

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)