Report for 5928.m00110

 > 5928.m00110, length: 515, copies: 1 

MMTVKIDYQVKKNWMGDPCLPEKYTWSGLKCRSQGVTSRIISLNLSNNDLTGSLPESLTNLPNIHVLDLSGNQLN

GTFPEALCKNRALTLRYDTANGDPCSPRSSKKKHKAVLAVAVVVPVVIVVILISAMLMLLFWKKQAIVKSRGQEQ

YGDHIHIPENREFTYEELVKITNNFSVFIGEGGFGPVFHGQLKDGTQLAVKMRSPTSMSGKGMPEFLAEVESLTT

VHHRYLVLLVGYCTDQDHLGLVYEYMPNGSLYDHLRGKNAIIQRLSWQHRAKIAHEAAQGLDYLHTGCVLPIVHR

DVKSHNILLGCDLTAKISDFGLSKSYLNVAQSHITATAAGTLGYIDPEYCLSGRLTISSDVFSFGVVLLEIVTGE

PPIIPTNGHIVQRIKEKVNMGNIEAIADPRLHGEFDISSIWKVVDIALLCTKEASSERPTMSMVVAQLKDALALE

EARLSYSTSDISQGGANAELSINSMPTASLSNLEEYAKKSLLPAVALFALCLHGVSDKSGDIAST

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	39	62	0.016
LRR [Pfam ls]	63	86	0.051
Ser/Thr pkinase [Pfam fs]	173	377	1.1e-45
Ser/Thr pkinase [Pfam ls]	173	440	8.2e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	39	62	0.00064
LRR [sensitive, ls]	39	62	0.016
LRR [sensitive, ls]	63	86	0.002
LRR [sensitive, ls]	63	86	0.051

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	25	443	2e-43
Xa21 [O. sativa]	43	260	1e-20
Pto [L. esculentum]	145	452	1e-53
Rpg1 [Hordeum vulgare]	159	445	7e-33
Rpg1 [Hordeum vulgare]	162	443	1e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	112	134	in -> out

Report for 5928.m00110

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)