Report for 5928.m00117

 > 5928.m00117, length: 464, copies: 1 

MAIKTQYQVKKNWMGDPCLPKESIWTGLQCRQDGVESKIISLDLSGNHFDGTIPQALCTKESLNLRYDTNDGDLC

NGKSPKKKNISVLTVAIVTPIAAVLLVSAILIFCFCHKKRKQQMTLGLVHQYSVQPTGISNSVSHVDIKGHVLMS

DDHEFTYEELVKITNNFSECIGEGGFGPVYLGQLQRSIQVAVKMCSRKSVHGQGIKEFLAEVDSLKTVHYKYLVM

LIGYCTNKNHLALIYEYMPNGSLFDHIRGKKANVQTMSWLQRARIVHEAAQGCVLPIIHRDVKSHNILLGEDMHA

KISDFGLSKSYINEAQTHISVTAAGTIGYIDPEYYFSSRLTMRSDVFSFGVVLLETVTGEPPIVPGVGHVVQRVK

QKVSDGDISAIVDPRLEDAYDIGSVWKVVDIALLCTREVSDDRPTMTEVVEQLKHALALEEARHIDGHRDNGQGS

IKPDLSANWGPLAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	165	362	2.2e-38
Ser/Thr pkinase [Pfam ls]	165	430	3.8e-35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	34	428	7e-32
Xa21 [O. sativa]	41	250	4e-15
Pto [L. esculentum]	151	437	8e-51
Rpg1 [Hordeum vulgare]	153	428	4e-21
Rpg1 [Hordeum vulgare]	154	430	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	85	107	in -> out

Report for 5928.m00117

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)