Report for 5953.m00114

 > 5953.m00114, length: 638, copies: 1 

MEHVVGASEATMRSLLTKLGGLLSQEYALIRGVRGDIQYIRDELTSMQAFIRDLSGTPEGKGDEHDHRMKDWMKQ

IRDVTYDIEDCIDDFAHRLSHDPGGDYLCGFVVSRVYEILTWWPRRDIASNIAELKMLAQQIGERRTRYGVENPQ

KRSGDENKSELVGVEAYMKELTKWVTNETYQDGVLSVLGFGGVGKTTIATALYRQLGDQFDRRAMVTVSQSSDVE

AILRSILEQVMPQSKDGQELQGGHASQKKLLHQAVISYLHPLMPKALRRRSSSNSNSDNSKIREGKLTRLPRALT

LDRQYDHDPQDGNDAAAGSSETVVTTPATKGTATSDEKPTSVIATIRGAFRPWDRRRHPPQDDKGGSTSGSGKEA

INIQTMNKPGEKNIQTMKRDGLSKLLQEHLNQKRYFLLIDDVWSATTWEQIRKHLPTDNLSYRIIVTTRFQAVAT

ACKRKESDRIHKVDVLRGKKPEKLFNEVESESRISKDGERKEIDDGEQKEREGQQKEIDGEQKDIVRPRRIWEMC

SGLPLAIVTMAGHVACNSDKDETHWLNVCKSLVPESGRDMTQEGVTRILGHCYNDMPAELRTCSLYLSIFPKGNK

ISRKRLTRRWIAEGFVSEKQGQSVEDVAEACFCWKYSH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	159	241	6.4e-10
NB-ARC [Pfam ls]	271	621	1.9e-10
NB-ARC [Pfam fs]	401	461	1.5e-09
NB-ARC [Pfam fs]	519	621	2.5e-20

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	232	1e-18
Pi-ta [Oryza sativa]	4	238	2e-15
RPM1 [A. thaliana]	8	234	4e-13
Xa1 [Oryza sativa]	377	636	3e-12
I2 [L. esculentum]	378	619	1e-12
Pib [Oryza sativa].	386	632	4e-22
Pi-ta [Oryza sativa]	395	628	1e-25
RPM1 [A. thaliana]	397	630	1e-19
Mla1 [Hordeum vulgare].	397	624	2e-24
RPS2 [A. thaliana]	405	621	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5953.m00114

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)