Report for 5953.m00119

 > 5953.m00119, length: 584, copies: 1 

MEAWEVIRLALLENNNGSRVITTTRIFEVASSADDVYTMRPLSPENSKRLLCKRIFSGEDNSDGVELAEVRDKLL

KKCDGLPLAVLTIAGALAGKTIEQWYMVYNSIAFGHVNGRVMDDMIRILSLSYYDLPPHLRTCLLYLSIFPEDYL

IKKDFLIWRWIAEGFIEYDGGRSLFGVGESYFAELINRSMIQPVEVGDRDSVDGCRVHGAVLHLLRYLAREENFV

TLLIDNMLSSGRGRPRRYLGLVGAPISELPDGIGELEFLQTLDLRETGIQELPRSICRLRKLMCLCVDSTARLPS

GIGNLVALEDLRLYSVSTLHFVKDELGQLTKLRILEIRFEELDEQMEDAFLRSLSNLQNLQTLVVDNFGGSSNFD

RMEKFFDPPRRLRRLTMTRTALPAEWIGSLSALYYLCIEAPELRLGDLKILGGLPSLRSLWISSRSNERPLVITA

HFQRGAMPKVRRVEFSFSLRDFSSRADFGFGLENLLSLEHVTIRLHDKVHSVEAALRHLTKKHPRRPTITLIRDG

EEPTDTAASNDTRTQEELAEMEAKQLEERRDKFIQELHEENLLLDDLQAQLMKISEHKR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	2	171	4.1e-06
NB-ARC [Pfam fs]	4	171	1.7e-34

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPS2 [A. thaliana]	2	363	8e-20
I2 [L. esculentum]	4	368	2e-22
RPM1 [A. thaliana]	4	515	1e-22
Mla1 [Hordeum vulgare].	4	519	1e-62
Pib [Oryza sativa].	4	505	8e-33
Pi-ta [Oryza sativa]	4	519	1e-41
Xa1 [Oryza sativa]	13	365	2e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	328	351
putative coiled-coil	535	566

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5953.m00119

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)