Report for 5974.m00212

 > 5974.m00212, length: 1498, copies: 1 

MEFVTGAMSSLIPKLGELLKEKYNLQKNIRGKIESLSAELRRAQAVLRMVSEVPQDQQNELVKLWASDLREASYD

MEDIIDAFLVHVDDDGPKPADPHVLRRLGKQVKKLFKKTKHRVTIADAIQEMEKKLLEIDARHGRYPVDNIVIPA

RPTPIDPHILNIEKMANNLVGIDEPRDELIKMLSQHERDNNLNTSNRKTKIVYVVGMGGLGKTTLATAVYEKIKV

GFPLNAFVPIGQNPNMKAILWNILHRFGLEKYLNCPNMEMLTVQELIGELKQFIKGKRSRMGSQCYKSTSLSCLS

AVLSMPVGSLTQSSSNPLTFEACIAPKHPGFCPRQLGRASMFTMWRVVGLVSTLVYVGLTRTKASNLHADKGGPG

TNQAATPSLPSQTIATTPGYQGARLTRDSRTRGARNSPPPPTSARRWRPHPPADDFHSGHGGGGATKEAATAVAF

YPVCAELLSNQSSMSSSHRPPARHTFLQSRLPPPVAAASSRRASHLWFPDVTGKRACLRAHGAYGGRALEVLLAH

HVVTGMPADMNYLADTGWVVTTRARRARLPSLVENDIWDKPSWQILESGLQDNDYGSKILVTTRKSEVATIISDV

YNMKPLSHDNSKELLYTRTGSEGKSLDSSSTEACDKILKKCAGVPLAIITIASLLASRSGLDWSEVYRAIDFGED

NYEMANTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLIWIWIAEGFVPEKQNTNLGLYELGESYFNELI

NRSMMIQPIENEFFGCIEGCRVHDMVLDLARSLTSEQNFVTVLDNDEQRKPESTNARRLVLHRTSITSYRFCNMD

MKKVRSFVATECNNGNNSVAPPRFQVLRVLSLDKCNGMEDYYIESILQYAGRLGHLRCLQLSSHTEFHRLPKELG

DLKFLKILDLGDCGGTIEELPEELGLLTHLLCLRIPRRLEMLPAGLIGKLTSLQELCISLIEEVAVRHFVQELGN

LRELRVLYAKIYIGLKDESMQRDFLQSLGCLHKVHTMNIYSIEVRECTRPDAAGSVSCPRLWQLSLPCIKFFSLP

VWINSSTLGCLSHLDVKVQVVKEQDMETLGRLPMLCYLKLDSQYTRLISIKKPADDGYFQKLRFFKTPRSFVRFD

LHGCESSSGASSFMPRLEHIEFSVDVRFLKDAADLHAGLNNLLAGFNDFGRTSLKSVDARIHCKDALAAEVQEAE

VALANAAHGHPNRPVLRTDRAYERMMRSPDDDKPTSWSDQKVFEIHVYPSSNDHHRYLSYLRLLKKPRLEKLIVN

IYVSKDGMVGDVDEAVAAARNVVDHHINHPTLEINRMEERYSDQFPHMSSTLLLIIDSAPDHPPHGLIDEDIKCN

LAAFERALRIVQSTSECPKENLLREPKISVCNLLYMQADKVYTLQVQESEGDRISIYRKELAITIIEYAESFNVA

PKGMADPWMDVRIIKGIIRAVIGGMDTEHIQQGTAALQEQIVNKLLKMFHCNEVARVNIEVSHRCPDVLPPPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	169	284	3.1e-11
NB-ARC [Pfam ls]	459	733	3.6e-11
NB-ARC [Pfam fs]	561	733	1.5e-32

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	283	2e-49
Pi-ta [Oryza sativa]	8	283	7e-13
RPS2 [A. thaliana]	548	910	5e-17
I2 [L. esculentum]	557	1082	5e-26
RPM1 [A. thaliana]	557	1094	1e-34
Mla1 [Hordeum vulgare].	557	1232	7e-77
Pib [Oryza sativa].	557	1146	2e-33
Pi-ta [Oryza sativa]	557	909	1e-33
Xa1 [Oryza sativa]	557	979	3e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5974.m00212

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)