Report for 5982.m00145

 > 5982.m00145, length: 821, copies: 1 

MSVPDENPIAVERKIFSAVDRILVNIKVLIGDIGSNLKKLPKQSDHSCNTGDDEFDDAVALRHIEVNIHAEQLGA

GVNRFQDSIGTKHHAEEESMPSLAEQEDEPARPMSGLHVRRLLDTLDGQLMQCLLCLAIFPPGEAIKKRLLIHWW

LGEGIVQSADAGKERFNELFDRGLVQPALRRGHCRRFWVMAKATSTNNAFLSVFNLDMEYVKIHIAKSRITRVVQ

LGRWKRSRKHHIELVGDNDLLKKVLACKNLRYLSLRGISLIESIPEAIGTLAELLVLDLRACHNLEKLPGSIGSL

LKLEYLDLSECFLLEEMPKEIGELSKLQVLKGFLVGSSRKKSSPCRLADLATKAQNLRKLNITTGRQSLVCDEDE

LCQLAKCQHLESLTITWIGEASTEPYLPLPSSLTKLDLRRAPTASLLNIIHPSTSVSLKRLYIRGGKLRTLGQDG

GWNVETLRARCLNDLECEWSELHGLFRELRFVEMWRCARLSFWPCDGRGVWDKGSPSLARRSIGVCYGVKGNNLP

PWHEVVQLYASNNIPAMRIFYPHHDVLEALRGTGIGISLDVEGQFLPSFASEPSVAAAWVKTNVQAFYPAVSFKF

ITVGNQVALREMRYILPAMQNIYAALSAVGLDHIKVSTSVRRDVLGLSYPPSAGAFSSAMEQYMAPIVQFLAKIG

APLLASVFPYFTYVHNQEGIDIDYALFTSPGTVVQDGEHSYQNLFDAIVDALYSAMEKVGGSTVRIVVSDSGWPS

AGAPAATKDNARAYVQNLINHVSKGTPKRPVPIETYIFAMFNENEKTGDEIERNFGLFEPDKSPVYPITFS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	127	161	2.3e-06
LRR [Pfam ls]	302	325	0.58

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	254	277	0.56
LRR [sensitive, ls]	254	277	11
LRR [sensitive, ls]	278	301	0.96
LRR [sensitive, ls]	278	301	19
LRR [sensitive, ls]	302	325	0.029
LRR [sensitive, ls]	302	325	0.58
LRR [sensitive, ls]	432	455	2.6
LRR [sensitive, ls]	432	455	51

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	114	390	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Glycosyl hydrolases family 17	513	820	1.4e-168

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5982.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)