Report for 5984.m00153

 > 5984.m00153, length: 2151, copies: 1 

MEAAGAGEAVAMTAAATGALGPVIEKLGDLLRNEHMAALEGSRGDIEFIKSELEPLRSLLLRIWDKEDRLDAACK

EWMAEARMLSYDMEDAIDGFRFMLAVEAAAATSPFEGMRNQVQELVNRCCEKQWITEAIIDADAPAALSSSPSLP

RKNASELVEVDEKKAELIKLLKHKERVCIHGSAGMGKTTLAGLAYQAVSEQFDCRTFVSVCPSQSMMHVLTSITS

EVIASAIIKAISDKQRELTVNNNTAPTTQGTGEADEQCLIDSILELLTYRRQVTDSSAPVAGTGIADGAKTDGSA

LPTTDTATLASTGIADTKTDGSSVALAGTGGIGDAKTESAPHAATGADNTKKALIDRISTRFVTNKRKLNASAQL

AGAGVDDDKQYLVNIVLKLLGEKRKVTDCAPVAGTTDVEDDEQYLVDILSQFLADQRYLVIVDDIWHCQQWEVIR

KSLVKNDRGSRIIMTTRVNSVVEKCCKDDHAVVCEVTALSMDAAVALSEKIFNVHTAPSDKKSCSSIAKLSGRMP

LAIICISAAVAQLLSPPSATNRFDVALCQALKGFAEIPCMKPLVESLVLGYHCLPPHLKTCLLECSIYTPNQRFE

RDDLIRIWMDEGFADEEQAPGYFEELVKWGYISISPAEGRRHSRVAEYEISAVVLAFLRFQAEEHGFVASAGYFS

NIESLCGRRHSRISVQGGLGSWVVSRLDFSCMRTLVVFGRASLIPFDRLSHLRVLHLDEEDTSLEGAADLYNFPD

LGDDDLVDICELLLLRYVKLKGCKITMLPPQIGQLKLLETLDVRGTGVRELPREIGELQRLKTLNVSNTAVTQVP

KEIGKLHMLKTLDVSDTNVRELPAEIRELENLETLDVSNTMVAKLPREIRALQLLKTLHVSGIDVTETELAEEIG

QLQHLETLDVSNTKVAKLPMEIWNLQQLKTLNISNTNVRELPWEAGQRSNSISVVAGNKDSPKVVNLLEGAVDNY

GHICSRENISITLFDRFGSSWEPIPVARFKIPGKHISLPDWLNKETLSDISSLEINLWKLREDDLKILQEMPKLQ

VLALRVEVLPRTAITGAGFSRLESFCVDCRVPRLSFQSEAMPVLKHLQFKFYAFRATKQEPMGIVHLSSLRSVDF

RCASGYTTDAPGIREIINQVRKEAKEHRNRITLCINTKEIVHDIVAGSTGTAGSSAGVALMGDDKKPIDGTSKEG

VMIQRVIREVKLKARALWHAIKKAGADPQDEMMALDALCSAVQSEMMTVTFDGSLGLPSSVGHPAVARHRYPLTC

DGPEGKAVTGRLIPLTGNSIEARQSSLFTNRLGGQGGDFLLKFKMDRRWMYYAHRSSTEYREGVTEFVIFADNDR

KSRMSMHMLCPCRDCKNEQMIEDSDEVHAHLIMNGFMKKYICWTKHGEQEAPDVTAEEVLDQDVENTAGAVAREG

MFVPSPLGGETIDLDTQCLSTMLHDIEDAKDNNRDFEKFRIRCLDVCPVCGASRYKREKSEGEGSKSKRGGPAKV

VWYLPIAERMKRMFANKEQAKLVRWHAEERKVDSMLRHLADLVQWRTIDKIYQEFSNEPRNMRFTMCTDDINPFG

DLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGLRQPGNDIDVFLEPIIDDFERLWNDGTRTWDAYAQEYF

NLHAMLFCTINDYLALGNLSGQTVKGKWACSECMEETRSKWLKHSHKTVYMGRRRFLPRYHPYRNMKKNFKGHRD

TVGPPAELTGTEVHNLVMGITNKFGKKRKVGKTKEKSTSKEKTEEHVEKQKTKERSMNILPPKVRHTIQRLYSFF

HAIGQKIIDPEGLDELQAELVRTLCHLEMYFSPTFFDIMEHLPVHLVRQTKCCGLAFMTQMYPCERYLGILKGYV

RNRSHPEGSIIESYTTEEVIDFCVDYMSETSSIGLPRSHHEGRLDGVGTVGRKTVRLDWKVYDKAHFTVLQHMTN

VVLYIDEHLAVLRQENPGRSESWGPEWSATTWQGYDINGYTFHTVKQDSKCTVQNSGLRIEAASDGGRRVQYYGR

VEQILELDYLKFKVPLFHCRWVDLRNVKVDNEGFTTVNLANNAYKDEPFVLAKQVVQVFYIVDPCNKKLHVVREG

KRRIVGLDNIADEDDYNQHVHGIGQEIPLEEEEEEDDVQYARVDHEEGLFL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	328	619	5.4e-09
NB-ARC [Pfam fs]	414	471	3e-10
NB-ARC [Pfam fs]	579	619	6.6e-08
LRR [Pfam ls]	764	786	4.1
LRR [Pfam ls]	810	832	1.2
LRR [Pfam ls]	833	855	4.2
LRR [Pfam ls]	856	878	0.75
LRR [Pfam ls]	904	926	3.4
LRR [Pfam ls]	927	950	1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	764	786	0.18
LRR [sensitive, ls]	764	786	4.1
LRR [sensitive, ls]	787	809	0.34
LRR [sensitive, ls]	787	809	7.9
LRR [sensitive, ls]	810	832	0.052
LRR [sensitive, ls]	810	832	1.2
LRR [sensitive, ls]	833	855	0.18
LRR [sensitive, ls]	833	855	4.2
LRR [sensitive, ls]	856	878	0.032
LRR [sensitive, ls]	856	878	0.75
LRR [sensitive, ls]	879	903	3.6
LRR [sensitive, ls]	879	903	84
LRR [sensitive, ls]	904	926	0.15
LRR [sensitive, ls]	904	926	3.4
LRR [sensitive, ls]	927	950	0.044
LRR [sensitive, ls]	927	950	1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	17	223	2e-16
I2 [L. esculentum]	412	949	2e-17
Pib [Oryza sativa].	413	815	2e-24
Mla1 [Hordeum vulgare].	416	862	7e-35
RPM1 [A. thaliana]	420	940	1e-18
Pi-ta [Oryza sativa]	420	873	7e-29
FLS2 [A.thaliana]	765	960	9e-13
N [N. glutinosa]	765	947	1e-12
Mla1 [Hordeum vulgare].	775	1110	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Transposase family tnp2	1521	1746	2.1e-111

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5984.m00153

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)