Report for 5989.m00149

 > 5989.m00149, length: 912, copies: 1 

MAGLFASSAVKWAIDNLSSLLPAAAAAGSSRGLDALEELRMLERTMRRIHATLRDAEQRWNIREESAKLRLEELK

ELAYDAEDVVEEYEYEVNRRKVEALERLAAVHGGGGASKRKREEVHEEQFSTESGIVPVPSELADRTRTVIQRFC

EIKDYCDSFSLSDNDGDRRIVPDINAMRQTSSFVFAPRILGRKKDMENVIAKLLSGEGSRVGGCMSVLAIVGMGG

LGKTTLAQLVYNDPRGALANEIKDKRVFLVFDDVWNERSDYWELLITPMFASKCCDIIVTTRNETVARLVQTTQM

YNMNCLSPDESWSLFKQTAFTEQENISPANLVEIARMVSEKCKGLPLVIKTVGSILRFETNEIKWRDVLQSELWD

LEQTQNEVLPVLELSYKHMPIDLKQCFVALSLYPKYYYLDENMVVWLWKLLGLLQGDEIGKLYFNELVQRSLLQS

SIHGQKEGEEFFRLEEDKQTEVPRGARYMSIMPRSLCRKRIQISNASQSLRAIIVIMGDIDIVNPEVLFTHCKKL

RIIYVVQGSVQKALLDFIGGMKLLRHLTLSGYECATHLSRPNSMSELFNLQTLDIQAYTLLKIGRLINLQTLPEI

HLMKCGCFVDIRELRNMNKIRKLCIRGLRNVPSIMHADEAHLQSKRNLEVLELDFDELFLDKDFDELRSCEHTEH

GDANEAAVTQSRGQLLEKLRPHYQSLKVLRIQNLNHGNYPSWLGSASFSKLTELKLQACQSQHLPTLGELPSLKS

LDISRMEFVEHIGHEFCSLQQRFKGFQALQDLSFDGMTRLSECSGLEDGIKAETHRYTTNNDGGAQSQDVSAKLN

TKATQKLPHRKRGVIIAELATQVTQQRRLHNCSDTEATKVANAKSSSDIQQWTSAKPPRSLFLHMASTITPWKRL

QHVMLPSFTAPH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	173	240	1.5e-14
NB-ARC [Pfam ls]	173	434	2.2e-45
NB-ARC [Pfam fs]	247	434	8.3e-44

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	799	3e-69
Pi-ta [Oryza sativa]	64	449	8e-17
Mla1 [Hordeum vulgare].	68	664	6e-26
RPM1 [A. thaliana]	75	601	1e-25
N [N. glutinosa]	116	501	2e-11
Xa1 [Oryza sativa]	160	756	2e-47
Pib [Oryza sativa].	188	625	2e-18
RPS2 [A. thaliana]	189	714	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	37	57
putative coiled-coil	67	91

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5989.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)