Report for 5996.m00132

 > 5996.m00132, length: 511, copies: 1 

MEATISVILTELAGRSISFLVSKYLNQQKPAPSDDERLENLQRLLLRFRIIVDEAEERCITNQAMLEQLSILRKE

MFRGYYTLDTFRCRAHQGKDHHGEVSPSFAISKFSHAKRIRFCSDSSSQSLGELQRVLGDLENTIADATEFIAFL

SSCPRLHRQPYSMYLILDQCMFGRQTEMEYLINFLLQPGNHSTLEPGVLPIIGPGRVGKSTLVEHACNDERVRNH

FSQIVFFTRADLEDESIVDLRDGGVIKHRNRASGVGRVLVIVELDGDRYSEGLDKNIDGVLLERLYSIYKTRIPR

DSKIIVTSRSDKIARLGTTPPLRLQLLSKEAYWYFFKVRTFGSMDASEHPEMASIAMDIAIETEGCFMGANVFSR

LLRSNANSHYWSLVLATLREFKKKNQHIWSFMYAADQIKALDRVNEPSEEATELLVILDNYQTICSHASSHCEAE

AEAPKISLVDALFGSVRPQGRFDALGWKSQIAPYYSYMYSCEIQRPKCLAARKNKMKKNGG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	155	441	1.8e-08
NB-ARC [Pfam fs]	171	226	1.5e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	119	390	3e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	36	58
putative coiled-coil	125	145

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00132

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)