Report for 5996.m00133

 > 5996.m00133, length: 510, copies: 1 

METFLSVILSDLASRSISLLINKCSKPTLPSVEERLQRLLLRVRIIVEEAEGRLITNQAMLQQLNMLRKEMYRGY

YTLGNFICHGHEEDNAKDHEVSNYFKPSKLNPAKRIRYLWDGGQTLQDQLQQVLGRLQVTLEDMREFVIFLNFCP

RLCRQPYSMHLLIDKCLFGRQMEMEHIMNFLLKEDTPGAENPGVLPIIGPGKVGKTTLIAHACDDERVRNHFSQI

VCFSEDDLEDASMETLRDSGVIKHQNNATGGKMILIIIELTRDIDEGVWRRLYSVCKCCVANGSKIIVSSRSNKI

ACFGTTQALRVKFFTQEAYWYFFKLRAFGSMDAEEHPKLESIAMEIAREWNGCFMSSGIYNELLKANFNTRFWST

VLTRIREFRKLNISLYANFDGPWEVVESAYVRRVNGISSEYILILHDYQTCSVPNMLHRCTNSAQSEVEVPQLSF

EDFQFGNVRPQGKFKVLGWRSHLPPYHDYMFSCEVLKSQHIVARNKRPRELCGRDFGLGA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	151	443	7.9e-08
NB-ARC [Pfam fs]	167	222	3.2e-09

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	34	377	9e-19
Xa1 [Oryza sativa]	106	377	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)