Report for 5996.m00135

 > 5996.m00135, length: 583, copies: 1 

MAARLYFPYPSSDDVRHEVRRKPSAAGDGAAKEAGGDSCGAGRIWRRRRQRRLGFFLQWRRLTATFCLLLSIQTT

YLHMETFLSAILSDLTSRSISFLVNKCSKPTTPTVEERLQQLLLRARVIVEEADERFITNQAMLQKLNILRKEMY

RGYYTLICFRCHNNEEDNVKDREVSYYFTPSKLNPAKRVRFCTGSGQTLRDQLQQVLGSLQVTLEDMREFLMFFN

SCPHLCRQPYSMHLLLDRCLFGRQMETEHIMNFLLKEDIPSAENLGVLPIIGPGKVGKSTLIEHACEDERVRNRF

SQIVCFNDDDVGHANMVALRDCGVIKHKNHSIGGDRMLIIIELMGDIDEGVWGRLYSASKISVAVGSKIIVTSRS

DKIVSFGTTQVLRVNFFTQEAYWYFFKVRTFGSLDAEEHPKLASLAMDIAREMNQCFMGSCIYSVLLKANFNARF

WSMALARIREFKLKNNLIYNAYLVGGPWEAVKPAYVRTVNKISSEYLVVLHDYQTLSVPNMVHCYTNSAQSEGEV

PEVSMQDFLFGSVKPQGKFKVLAWRSHLPPHYNYIFNCEVRRPHHMVTSKKRSHKLCT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	229	530	9.9e-06
NB-ARC [Pfam fs]	245	300	6.8e-06

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	112	474	1e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)