Report for 5996.m00138

 > 5996.m00138, length: 523, copies: 1 

METLFSAILGELTSRSVSFLIDRCSSKPSSPPMAATFMEEKIQRLERMLLRLATAIEEAEGKHITNQAMLRQVNM

LRQDMHKGYYALDTFRIQKHQEEDMNDDDDNEVSYNTLSLSKFNSIKRARVLTGTRRHGDMREFDQMVDIIEITM

AGMAEFVMLLNNYPSMHRQPYNTYMFMDKCMFGRQMEMEHIIKFLLHPETPYSDIFDVLSIIGPAKVGKSTLVEH

VCNDERVRNHFSRIIFLSDSDLSEQKSLLILRDSGVIRHKHNSSLASSGGERLLVVVELTEDVSDDEWRRMYSSS

RSCISAGSKIIITSRSEKIAKLGTTQPLRLKFLSREAYWYFFKVLAFGSSDPKDYPEVASVSMAMFNGYFDREMY

NTFIGPFIDLNNMATFIQASIYNGDWLSLRERFRTKESKSQLLPNKGSGDFGMKSKCVVIPRTDGNVNYYCEIFE

HCRVELAHAEDQKAPKIGIQDILSGRVEPHGKFDLVLWRSHLPPYYSYIYSSEIHEFKSATTCRIRLRQKRKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	166	423	3.6e-07
NB-ARC [Pfam fs]	181	258	5.5e-09

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	7	361	5e-15
Xa1 [Oryza sativa]	181	408	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	37	62

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)