Report for 5996.m00142

 > 5996.m00142, length: 489, copies: 1 

MVMPPLLPCLLLIQTCYAKADCREKYRNLNFKEMWSFWILSDLATRSISFLINKCMKQTESAMEERLRWLLLRVR

IIVEEADERIITNQVMLQQLNILRKEMYRGYFTLDIFRCHGYKGDNTKDHQVSNSFALSKFNPAKRVRLSRVSGH

SVQKQLQQVLGSLEVAIEDTSEFVMFLNNCPRLCRQPYSMHLLLDNCLFSRQLEREHIMNFLLKENTPGAENLGI

LPIIGPENVGKSTLIEHACDDERVRNHFSQIVCFNDNDLEDANMVTLRNRGEIKHQNHATDGERILIIIELIRDI

DEGAWRRLYSAYKNCVANGSKIIVASRSDKIANFGTTKALRVTLLTQEAYWYFFKLRTFGSTDAAEHPKMASIAM

DIAIELNGCFMGSSIYTLLLRANFNAQYWSMALAIIRKFRKLNLLLYGACFFDGPWQRVEPAYVRRVNKICPEYL

VLLDDYKICSGQNNIVHCHTNCADNEDEVPNACNIRKAS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	182	451	6e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	65	408	3e-16
Xa1 [Oryza sativa]	198	404	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00142

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)