Report for 5996.m00143

 > 5996.m00143, length: 532, copies: 1 

MGKRKIGFIPRMNTLLSAILGELAGRSFSFLIDRCYSKLPLLSNEEKIQRLERMLHRLAAAIEEADGRRILNHGM

LRHINILRQDMYRGYYILDSFRFPEAHEEEIMSENNDKVSYSLALSKFNSAKRARIPIGTRRHGDRGELEQVIDN

LEIAMADMVEFFLLLNNYPSIHRQPYNSYLFMDKCMFGRQMEMEHIINFLLRPEPPNTLSVDNLGVLPIIGPAKV

GKSTLVKHVCGDERVCNHFSRILFLTEGDFREEKSLLTLRDSGEIRHMHTSSSVSSGGERLLVIIELAEDVADDK

WTMMCASLRSCISAGSKIIITSRLEKIAKLGTTQPLRLKFLSREAYWYFFKVLAFGSSDPKEHPELASVSMMMFN

VYFDHELYKNFTGPFMDLNIMASLIQATFYEGNWLSLHAHTRSYFLLRRGLGDDFELKTKCVPIPKKNTVVQQYC

VISDYCRVGVAHEEDQKVPKIDMQDVLSGRVAPDGRFDVVLWRSHLPPYYSYIYSCEIHEYRPVLATCKMELRQK

RKKIRLN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	170	451	7.2e-07
NB-ARC [Pfam fs]	186	244	2.9e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	18	369	3e-15
Xa1 [Oryza sativa]	177	412	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	45	66

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5996.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)