Report for 6001.m00156

 > 6001.m00156, length: 931, copies: 1 

MPPLSVQKTGQGFHLEILVEGGVYLDNAPQRVTAPEGVAAAGPAKHWARLSPGTLYPRRRGPLPANSDTTSLTSF

YEIGNVAEAVKTFQQMASALTGVMTSVINKLTALLGKEYMKLKGVQGEVEFMIDELSSMNALLHRLAEEDQHLDV

QTKEWRNQVREMYYDIEDCIDDFMHHLGHTDIAESAGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLR

YKLDERTFNLSTAGAIDPRLPSLYAESDGLVGIEQPRDVVIKLLTEGEGASSQKLKVISIVGPGGLGKTTLANEV

FRKLESQFQCRAFVSLSQQPDVKKIVRNIYCQVSQQEYGNIDIWDEEKLINATREFLTNKRYFVVIDDIWSTQAW

KTIRCALFVNNCGSRIMTTTRNMAIAKSCCTPDHDRVFEIMPLSIDNSKSLFLKRIFGSKDVCIPQLDEVCYEIL

KKCGGSPLAIITIASLLANKANTKEEWERVRNSIGSTLQKDPDVEEMRRILSLSYDDLPQHLKTCLLYLSIFPED

YEIERDRLVERWVAEGFIITEGGHDLKEIGDCYFSDLINRSMIEPVKIQYNGRVFSCRVHDMILDLLTCKSTEEN

FATFMGGQNQKLVLQGKVRRLSLNYYTQDHIMVPSTAIITHCRSLSIFGYAEQKPPLSMFPVLRVLDIENGANRD

QNQPGLLGIFLVGAKKSDEAHIDYKVFADNLVSSLRKLGRLNLRIMCILGYYACSIEFLLDSWFPSPHLLQSFAM

GMNYHFPRVPSWIASLDNLTCLEINIDLVDEKVIQILGDLPVLIFLWLISKEAGPNERLVIRSNMFVCLKEFHFT

CWRNWEGLMFEAGAMAKVEMLRVSFDAGGSVLDFGIQHLASLRHLIVEIVCGGATLREVEALEDAIRHSADLLPC

HPAVEVRTWDEEKMVKEEVQIMAEEKIQTNS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	240	548	1.1e-66
NB-ARC [Pfam ls]	240	548	3.4e-67

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	95	821	1e-124
RPM1 [A. thaliana]	103	672	4e-55
I2 [L. esculentum]	142	598	4e-41
Pib [Oryza sativa].	142	427	5e-16
Pi-ta [Oryza sativa]	155	892	7e-96
L6 [L. usitatissimum]	247	522	7e-12
Pib [Oryza sativa].	250	719	4e-54
M [L. usitatissimum]	251	522	4e-13
RPP5 [A. thaliana]	253	528	2e-11
RPS2 [A. thaliana]	255	569	1e-21
Xa1 [Oryza sativa]	277	623	1e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	207	227

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 6001.m00156

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)